Thermoactinomyces vulgaris: AB849_010140
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Entry
AB849_010140 CDS
T05864
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tvu
Thermoactinomyces vulgaris
Brite
KEGG Orthology (KO) [BR:
tvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvu03032
]
AB849_010140 (topA)
03400 DNA repair and recombination proteins [BR:
tvu03400
]
AB849_010140 (topA)
Enzymes [BR:
tvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB849_010140 (topA)
DNA replication proteins [BR:
tvu03032
]
Prokaryotic type
DNA Topoisomerases
AB849_010140 (topA)
DNA repair and recombination proteins [BR:
tvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB849_010140 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QBK13926
LinkDB
All DBs
Position
1967268..1969343
Genome browser
AA seq
691 aa
AA seq
DB search
MADSLVIVESPAKAKTIKKYLGSKYIVKASMGHVRDLPKSQMGVNVEKQFEPKYITVRGK
GDILKELRDAKKKVEKVYLAADPDREGEAIAWHLAHSLNVPLEQKCRVVFNEITKQAVKE
AFKHPREINMDLVNAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKLIIDREN
EIREFKPEEYWTVTAVLLSGEEPFEAKFYGYGKKKTKLGSKEDVDQLLEAIKGKRFVVEE
VKTSERRRNPAGPFITSTLQQEAARKLGFRAQKTMAVAQQLYEGVDIGKQGTVGLITYMR
TDSTRISKTAQSEAREYITKTFGAEYLPKTPHSHKQKSGAQDAHEAIRPTSVFRVPSEIK
SYLSRDQYRLYKLIWDRFVSSQMAPAVFDAVSANIRVGEALFKASGSKVKFPGFMKVYVE
GEDQKKKEEDKFLPELAKGQVLKRKSVEPKQHFTQPPPRYTEASLVKELEDKGVGRPSTY
APILDTIQKRGYVLLEDKRFVPSELGEIVIDLMQQFFPEILNVEFTANLEEDLDKVEEGK
ADWIEILDRFYHPFQKQLSVAEKEMEEVEIQDEVSGEVCEKCGSPMVYKFGRYGKFLACS
AFPDCRNTKPIVKSTGVPCPKCKEGEIVERKSKKSRLFYGCSRYPECDFVSWDRPVPRPC
PKCGNLMVEKKAKKKQTMIRCTVCDYEEEKN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcactagtgattgttgaatcaccggctaaagccaaaaccataaaaaaatat
ttgggaagcaaatacatcgtgaaagcttccatgggacatgtgcgggatttgcccaaaagc
cagatgggcgtcaatgtggaaaaacagtttgaacccaaatatatcaccgtccgcggaaaa
ggggatatcttaaaagaattgcgtgatgccaagaaaaaagtggaaaaggtctatctggcg
gcggacccggaccgggaaggtgaagcgattgcctggcatctggcacacagtttgaatgtt
ccgctggagcaaaaatgccgggtcgttttcaatgaaatcaccaaacaagccgtcaaagaa
gcattcaagcatccccgggaaatcaacatggacttggtgaatgcccaacaggcgaggcgg
attttggatcggctggtgggttataacatcagcccgctgttgtggaagaaggtgaaaaaa
ggcttgagtgccggacgggtccaatcggtggcggtcaagttgatcatcgaccgggaaaat
gaaatccgggagttcaaaccagaagagtactggaccgtgacggccgttctgttaagcggc
gaagagccttttgaagccaaattttacggttacggaaaaaagaaaacgaagttgggttcc
aaagaagatgtggatcaactgcttgaagcaatcaagggaaagcgcttcgttgtcgaagag
gtgaaaaccagcgaacgcagacgaaatccggccggcccgtttatcacgagcacgttgcag
caggaagccgcccggaagctcggttttcgcgcccagaagacgatggcggtcgcccagcag
ttatatgaaggggtggacattggcaaacaaggaacggtggggctgatcacctatatgcgg
acggattccacccggatttcgaaaacggcccaaagcgaagcgcgcgaatacatcaccaaa
acatttggagcggaatacttgccgaaaacaccgcactcgcacaaacagaaatcgggcgcg
caagatgcccacgaagcgattcgtccgacctctgtcttccgggttccgtcagaaatcaaa
agttatttgtcccgggaccaataccggttgtacaaattgatttgggaccgttttgtgtct
tctcaaatggcgccggccgtttttgatgcggtttcggcaaatattcgggtcggggaagcg
ttgtttaaggcaagcggatccaaagtcaagttcccgggatttatgaaagtgtatgtggaa
ggcgaggatcagaagaaaaaggaagaagacaagtttttgccggagctcgccaaggggcag
gtgttaaagcggaagtccgttgagcccaaacaacatttcacccaacctccgccccgttat
accgaagccagcctcgtcaaagagctggaagataaaggggttgggcgcccgagtacttac
gccccgattttggataccatccagaaacggggatatgtccttctggaagataaacgtttt
gttccttccgagctgggggaaattgtgattgatttaatgcagcagtttttcccggaaatc
ttaaatgtggagtttacggccaatctggaagaagacctggacaaggtggaggaaggaaaa
gccgattggattgaaattttggaccggttttatcatccgtttcaaaaacagttgtccgtg
gcggaaaaagagatggaagaagtggaaatccaagacgaagtgtccggggaagtctgtgaa
aagtgtggcagcccgatggtatacaagttcggccgctacgggaagtttttggcttgttcc
gcttttccggattgccgcaataccaaaccgattgtcaaatcgaccggggtcccgtgcccc
aaatgcaaagaaggggaaatcgttgaacggaagagcaaaaaatcccgactgttttacgga
tgcagccgatacccggaatgcgattttgtttcgtgggaccggccggttccccgtccatgc
ccgaagtgcgggaacctgatggtggagaaaaaagcaaagaaaaagcagaccatgattcgt
tgtaccgtttgtgattatgaagaagaaaaaaattga
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