Thermoactinomyces vulgaris: AB849_010565
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Entry
AB849_010565 CDS
T05864
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tvu
Thermoactinomyces vulgaris
Pathway
tvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB849_010565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvu03019
]
AB849_010565
03009 Ribosome biogenesis [BR:
tvu03009
]
AB849_010565
Enzymes [BR:
tvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB849_010565
Messenger RNA biogenesis [BR:
tvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB849_010565
Ribosome biogenesis [BR:
tvu03009
]
Prokaryotic type
rRNA helicases
AB849_010565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QBK13999
LinkDB
All DBs
Position
2074382..2075965
Genome browser
AA seq
527 aa
AA seq
DB search
MNRFDQFQLSNEILNGIHDIGFEEPSPIQAECIPAVLRGEDVIGQAQTGTGKTAAFGIPI
LERVNPKQPHVQSIILAPTRELAIQVSEELRKIGRKKRVKTLPVYGGQSIGRQIKALQQG
VHVVIGTPGRLLDHLRRGTIDPSHVETVVLDEADEMLDMGFIDDIEQVFRFMPKHHQLLL
FSATMPSAIRQLAKKYMRKPKYITVNRGEVTVPVIRQIYYRVLDSYKVDALCRILDSEEV
DLAIIFCRTKKGVDELTDSLQGRGYLAGGLHGDLAQQQRDRVMQSFRSGEIELLVATDVA
ARGIDVGSVSHVINYDIPQDVESYVHRIGRTGRAGRKGVALTLVTPREMKQLRTIEQETG
TKLKARELPTLEEVAAKQQESWIAQIENTIRSDVDMTLFEEMTGELSKKFSMEKVVAASL
YLAFSDRFVKSIDNTYHFGETGASPGMVRFFINVGRNANLHPQELAKAISENAGISLRQV
GKINIYDRFSFVEVPEDVAPFVYEAFRQSKINGSRVNMEPARPRNRS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttttgatcagtttcaattaagcaatgaaatattaaacggaatacacgatatc
ggatttgaagaaccttctccgatacaagcggagtgtattccggccgtgctccggggggaa
gatgtgatcgggcaggcgcagaccggaaccggaaaaaccgcggcgttcggcattcccatt
ttggagcgggtgaatccgaaacagccgcatgtccaaagcatcattttggccccgacccgt
gagttggcgattcaagtgtcggaagaattgcggaaaatcgggcgcaaaaaacgggtgaaa
acattgccggtgtatggcgggcaatcgatcgggcgccaaatcaaggcgctgcaacaaggg
gttcatgtggtgatcgggactcccggccggctgttggaccatttgagacgcggcacgatc
gatccttcccatgttgaaaccgtggtgttggatgaagcggatgaaatgctggacatggga
tttattgatgacattgagcaagtgttccgcttcatgccgaaacatcatcaattgttgctt
ttttcggccaccatgccttcggccattcgccaattggcgaaaaagtacatgcgcaagccg
aagtatatcaccgtcaaccggggcgaagtgacggtgccggtgatccgccagatttattat
cgcgtgttggacagttacaaggtggatgccctgtgccggattcttgacagtgaagaagtg
gatttggcgattattttttgccgtacgaaaaaaggcgtggatgaattgacggattccttg
cagggacgaggctatctggccggcggactgcacggggatctggcccagcaacagcgggat
cgcgtgatgcaatccttccgcagcggggaaattgaacttttggtggcaaccgatgtggcc
gcccgcggcattgatgtggggagtgtttcccatgtgatcaattacgacatccctcaagac
gtggaaagttacgtgcaccggattggaagaacgggcagagccggacgcaaaggggtggct
ctcacgctggtcacccccagggaaatgaaacagcttcgcacgattgaacaggaaacgggc
accaaattgaaggcccgggaactgcccacgttggaggaggtcgcggcgaagcagcaagaa
agctggatagcgcagattgaaaataccatccgttccgatgtggacatgacattgtttgag
gaaatgaccggggaattgtcgaagaaattttccatggaaaaagtggtggcggcttcgttg
tatctcgctttttccgaccggtttgtcaagagcattgacaacacttaccatttcggggaa
acgggggcatcgccaggaatggtccgcttttttatcaatgtggggcgaaatgccaacctg
catccgcaggagttggccaaagcgatttcggagaatgcggggatcagcttgaggcaagtg
gggaaaatcaacatctacgaccgcttttcttttgtggaggttccagaggatgttgcgcct
tttgtttatgaggcgttccggcaatccaaaatcaacggttcccgggtcaatatggagccg
gcccgtccccgcaaccgttcataa
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