Thermatribacter velox: QBE54_06520
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Entry
QBE54_06520 CDS
T10305
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tvx Thermatribacter velox
Pathway
tvx03030
DNA replication
tvx03430
Mismatch repair
tvx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QBE54_06520
03430 Mismatch repair
QBE54_06520
03440 Homologous recombination
QBE54_06520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvx03032
]
QBE54_06520
03400 DNA repair and recombination proteins [BR:
tvx03400
]
QBE54_06520
Enzymes [BR:
tvx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QBE54_06520
DNA replication proteins [BR:
tvx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QBE54_06520
DNA repair and recombination proteins [BR:
tvx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QBE54_06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
CDC24_OB3
DUF655
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WZL75253
LinkDB
All DBs
Position
1309468..1312896
Genome browser
AA seq
1142 aa
AA seq
DB search
MKFVHLHVHSEYSLLDGAIRIDDLLDKVQQNDMEAVALTDHGVMYGIVEFYKKAKSRGIK
PIIGCEVYVAPGSRFEKTALKGSEPAYHLVLIAKNQEGYRNLVELVSKAYLEGFYYKPRV
DKTLLREHSRGLFALSACLAGEIPRAILSGELQKATQIALEYQEIFGKGNFFLELQENLI
PEQKVVNQALLEISRKQGIPLIATNDAHYLEAADAAVHDVILAIQTATTLEDPKRLRFPT
QQFYLKTKEEMIKSFQNIPDALENTLLIATESNVELELGKTLLPDFKPPQGFDLHGYLRH
LCLEGLKKRYGDPPPEVAQKQLEYELKIIHDMGYTAYFLIVWDFINFARQKGIMVGPGRG
SAAGSIVAYTLGITNIDPLRYGLLFERFLNPERVSMPDIDIDFCFERRDEVIRYVAEKYG
STNVAQIITFGRMMARQAIRDVGRALGWSYGDVDKIAKLIPGGPGVTLERALKENSQLRK
LWEDNAQTRKLLEIALKVEGLCRHASVHAAGVVISDKPLTYYVPLQKMNGQEIVTQFDMD
SLQELGLLKMDFLGLRTLTVIERTLNIVKKTQQEEIDLDNIPLDDPQTLELLARGETTGV
FQLESSGMKELLKKLKPEGIEDLIALLALYRPGPLGSGMVDDFIQRKHGKVKIEYPHPHL
REILQETYGVILYQEQVMKIASHMAGFTLGEADILRRAMGKKKPEVMKEQREKFIEGARK
RGYDPKIAAEIFDLIEYFAGYGFNKSHSAAYALISYQTAYLKAHYPTEYLTACLTSVASD
TDKVAKFITECKNLGIKVLPPDINESLANFTVVGEKKIRFGLAAIKNVGENAVEEILSHR
EESKYRSIFDFLQRVDNRIVNKRVLESLIKAGAFDSLHPNRAQLLDSLEDLIKHYTQSKK
KDSKRQISLFGNDQHDAENPEHLLKEPRELEHQEILRMEKETLGLYVSDHPVSKILSQYP
HLNFLSIEDAKLLNDKVNVRLVGVVTAIRKIVTKKGQDMLFVTLEDESGAIEAIVFPNLV
EQFQENFAVNNVLCVEGKIDSMDNSDNKIIAERLISLDELSQEAYPSIFIELETSKDIRR
TIHYLKDCLSRFPGKHPVVLNLAEREKKWSIELGKNFRVAWNEDLISALEGVVDKNQIWI
TG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtacatcttcatgtccatagtgaatatagccttttagatggggcaattcgc
attgatgacctgttagacaaagtccagcaaaacgatatggaagccgtggcccttactgac
catggcgtcatgtatggaattgtcgaattttacaaaaaggccaaatcccgaggaatcaaa
cccattatagggtgtgaagtttacgttgccccaggtagtagatttgaaaaaacagctctt
aaaggaagtgaaccagcttatcatctggtacttatagcaaaaaaccaggaaggatatcgg
aacctggttgagctggtaagtaaggcatatcttgagggtttttactataagccccgggtt
gataagacattactcagagaacactccagaggcttgtttgctttatctgcctgtttggct
ggtgaaataccaagggcgatactctctggtgaacttcagaaggcaactcaaattgccctt
gaataccaagaaatctttggcaagggtaatttctttctcgaactacaggaaaatctcata
cctgaacaaaaagtcgttaatcaagctttattggaaataagccgcaaacagggtattcct
ttgatagctaccaacgatgctcattatctggaagctgcggatgctgccgtacatgatgtt
atactggctattcaaactgcgaccactcttgaagaccctaaacggctgcgctttcccact
cagcagttttatttaaagactaaagaagaaatgataaagagctttcaaaacatccctgat
gcgctggaaaacactttgttgattgcgactgagtccaatgtagaacttgagcttggtaaa
accctgcttccagatttcaaacctccccaagggtttgatcttcacggctaccttcgtcac
ctgtgtcttgagggcctgaaaaagcgatatggagatcctcctcctgaagtagcccagaaa
cagttggaatacgagttaaaaatcattcacgacatgggttatactgcttatttcctgatt
gtgtgggactttataaatttcgcgcgccaaaagggcatcatggtaggtccaggcaggggt
tctgcagcagggagtattgtcgcctatacactgggaataaccaatattgatccactcagg
tacggtctcttgtttgagcgctttttaaacccggaaagagtgagcatgccggatatagac
atcgatttttgttttgagcgtcgagacgaagtcataagatacgttgctgaaaaatacgga
agcaccaatgttgcacagattattacctttggtagaatgatggctcgtcaggcaattcga
gatgtaggaagagctttgggttggagttatggggatgttgacaagatagcaaagttaatc
cctggggggccaggagtaacactggaaagggcattaaaggaaaattctcaattgcgcaag
ctctgggaagacaatgcacagaccaggaagcttttagagattgctctcaaagttgaggga
ttgtgccgacatgcttcagtacatgcggcaggtgtagtcatctctgataaaccactgacc
tactatgtaccgcttcaaaaaatgaacggccaggaaatagtaacccaatttgatatggac
tctctccaggagctgggtctccttaaaatggattttcttggcttgcgcaccctgacggta
attgaaagaacgctgaacattgtcaaaaaaacgcagcaggaggaaatcgacctcgacaat
ataccccttgacgatcctcaaaccttagagcttctggcgcgaggagagacaaccggggta
tttcagcttgaaagttcgggcatgaaagagctcctgaaaaaattaaaaccagaaggtatt
gaagatcttatagctctcttggctctttatcgccctggacccctgggaagcggcatggtt
gacgatttcatccagcgcaaacatggaaaagttaagatcgaatacccccatcctcatctt
agagagattctacaagaaacctatggcgttatcctttaccaggagcaggttatgaaaatt
gccagccatatggctggttttaccctgggagaagctgacatccttcggagagctatgggt
aagaaaaaacccgaagttatgaaagaacaacgtgaaaaattcattgagggagctcgtaaa
agaggttatgatcccaaaattgctgcggagatctttgatcttatcgagtattttgcgggc
tatggctttaataaatcccacagtgcggcttacgcactgatttcctatcaaacagcctac
ctgaaagctcactatcctacggaatatcttaccgcttgcttgaccagcgtagccagcgac
accgataaggtagccaagtttataacggaatgtaagaacctgggcataaaggttttacct
cctgacattaacgaaagtctggcgaattttaccgtggtgggcgagaaaaagattcgtttt
ggtcttgcagcgattaaaaatgttggtgaaaatgccgtcgaggaaatcctttcccatcgt
gaagaatcaaaatacaggagcattttcgactttctgcagagagtcgacaaccgaatagtg
aacaagagggttttggaaagcttgataaaagctggtgcctttgattccctgcaccccaac
cgagcacagcttttggattcacttgaagaccttatcaaacattacacacaaagtaaaaag
aaagactctaaaaggcagatttctctttttggcaatgaccagcacgacgcagaaaaccca
gagcatttgcttaaagaacccagagaactcgaacaccaagaaatcttacgaatggagaag
gagactttggggctttacgttagcgatcatccggtatcgaaaatactttctcagtatcca
catctgaactttttgtccatcgaagacgcaaaacttctgaacgataaggttaacgtgcgc
ctggtaggagtagttactgctattcgtaaaatagtaaccaaaaaggggcaggacatgttg
tttgtgaccctggaagatgaatcaggcgctatagaggctattgttttcccgaatcttgtt
gagcagtttcaggagaactttgcagtaaataatgtgttgtgtgttgagggtaaaatcgac
tccatggataacagtgacaataaaatcattgcagagaggctgattagtcttgacgaacta
tcccaggaggcatatccgagtatatttatagagctggaaacctcgaaagatatacgtcga
accattcattacttaaaagactgtctgtccaggtttccaggcaaacatcccgtggtactc
aatctcgccgaaagggaaaagaagtggtccatagaacttggcaagaactttcgggtcgcc
tggaatgaggatttaatcagtgctctggaaggagttgtggataaaaatcaaatctggatt
actggctga
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