Thalassolituus hydrocarboniclasticus: HUF19_00780
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Entry
HUF19_00780 CDS
T08537
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
twan
Thalassolituus hydrocarboniclasticus
Pathway
twan03420
Nucleotide excision repair
twan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUF19_00780 (uvrD)
03430 Mismatch repair
HUF19_00780 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twan03400
]
HUF19_00780 (uvrD)
Enzymes [BR:
twan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUF19_00780 (uvrD)
DNA repair and recombination proteins [BR:
twan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUF19_00780 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HUF19_00780 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UXD86070
LinkDB
All DBs
Position
171751..173949
Genome browser
AA seq
732 aa
AA seq
DB search
MDISLLLDQLNDGQRNAVAASSRHQLVLAGAGSGKTRVLVHRIAWLLQVENVSPFSVMAV
TFTNKAAKEMKGRLEQLLQIPANGLWVGTFHGLAHRLLKLHWREARLPQHFQILDSDDQQ
RLIKRLMKANNIDDSRYPPKQIQWFINEQKDEGRRAAHVMPSADPFSRTMQQVYQLYEDN
CQQNGLVDFGEILLRAHELWLHHPDLLEHYQQRFRNILVDEFQDTNNIQYAWIRMLAGDR
VSVMAVGDDDQSIYGWRGANIDNIRNFQHDFPGAELIKLEQNYRSTKTILEAANAVIANN
TGRLGKSLHTEGEEGETIQLYSAFNEQDEARYIADQVDEWARSGRQRAEMAVLYRSNAQS
RTLEEALLRAGIPYRIYGGQRFYERLEIKNALAYLRLLLNRQDDASVERVINVPARAIGE
KTVDILRSYARDQGSSLWAAAEAAVQHGMLPKRASAAVQSFLDLVEEMSVGIDELELHEI
VDQVINQSGLIEHHKKEKGEKGQARLDNLEELINAARQFESDDGFNADDNDDAEANELAL
FLDRAALDAGDGQADEYEDAVQLMTLHSAKGLEFPQVVLAGLEEGLFPHKMSMDEAEGLE
EERRLAYVGITRAMEKLIITHAESRRLHGQENYSTPSRFIREIPSELIAEVRLKNSVSRP
LTARDPSTRMKQPSFVHGNLPYSLGQRVYHEMFGEGTVLQFEGQGSGLRVQVNFDDAGSK
WLVASFAKLDAL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcattacttctcgatcagttaaacgacggccagcgcaacgcggtggctgca
agttcacgccatcagctggtactggccggcgccggctcgggtaaaacccgcgtgctggtg
catcgcattgcctggctgctgcaggtggaaaatgtctcgccgttttcagtgatggcggtg
acctttaccaacaaggccgccaaagagatgaaaggccgtctggagcagttgctgcagata
ccggcgaatggtctgtgggtcggaaccttccacggtctggcgcaccgcctgctgaagctg
cactggcgcgaagcacggctgccgcagcactttcagattctcgacagcgacgatcagcag
cggctgatcaagcgcctgatgaaagccaacaatatcgatgacagccgctatccgccgaag
cagattcagtggtttatcaacgaacagaaagatgaaggtcgccgtgcggcgcatgtgatg
ccatcggccgatccgttttcgcgcaccatgcagcaggtctatcagctgtatgaagataac
tgccagcagaacggactggtggatttcggtgagattctgctgcgtgcgcatgagctgtgg
ttacatcacccggatttactggagcattatcagcagcgcttccgcaatattctggtcgac
gagtttcaggataccaacaatatccagtacgcctggatccgcatgctggccggtgaccgt
gtatcggtgatggcagtgggcgatgacgatcagtctatttacggctggcgcggcgccaac
atcgataatatccgtaatttccagcacgattttcccggcgccgaactcattaagctggaa
cagaattaccgctcgaccaaaaccattctggaagcggctaacgcggtaatcgccaacaat
accgggcgtctgggcaagagcctgcacaccgaaggtgaagaaggcgaaaccatccagctg
tacagcgcttttaacgagcaggatgaagcgcgttatatcgccgatcaggttgatgagtgg
gcgcgcagtggccgtcagcgtgccgaaatggcggtgctgtaccgttccaatgcacagtcg
cgtacgctggaagaagccttgctgcgtgccggtattccttaccgtatttatggcggtcag
cgtttctatgaacgtctggaaattaaaaatgccctcgcttatctgcgtttattactgaac
cgtcaggatgacgcatcggttgagcgtgttattaatgttccggcgcgtgcgattggcgaa
aaaaccgtggatattctgcgcagctatgcccgcgaccagggcagctcgttatgggcggcg
gcagaagcggcggtacagcatggcatgctgccgaaacgtgccagtgcggcggtgcagagt
tttctcgatctggtcgaggaaatgagcgtcggtatcgacgagctggagctgcatgaaatt
gtcgatcaggtcattaatcagagtggtctgattgaacaccataaaaaagaaaaaggtgaa
aagggccaggcgcgcctcgataaccttgaagaattaattaatgccgcacgccagtttgaa
agcgacgatggttttaatgccgacgacaacgatgatgccgaagcgaatgagctggcatta
ttccttgatcgtgccgcgctggatgccggtgatggtcaggccgatgaatacgaagatgct
gtgcagttaatgacgctgcattcggctaaaggtctggaatttccgcaggtggttctggcc
ggtctggaagaaggtttattcccgcataaaatgtcgatggacgaagccgaaggcctcgaa
gaagaacgccgtctggcctatgtcggcattacccgggcaatggaaaaactgattattacc
catgctgaaagccggcgtttacacggccaggaaaattacagcacgccatcgcgttttatc
cgcgaaattccatccgaactgattgccgaagtacggctgaaaaacagtgtcagccggccg
ctgacggcccgtgatccttcaacaagaatgaagcagccgtcttttgtccacggtaatctg
ccttattctttgggtcagcgtgtttatcatgaaatgttcggagaaggcaccgtgctgcaa
tttgaagggcagggcagcggtctgcgggtacaggttaattttgatgacgccggcagcaaa
tggctggtggccagctttgccaaactggatgcactttaa
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