KEGG   Thalassolituus hydrocarboniclasticus: HUF19_05360
Entry
HUF19_05360       CDS       T08537                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
twan  Thalassolituus hydrocarboniclasticus
Pathway
twan03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:twan00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HUF19_05360 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:twan03019]
    HUF19_05360 (rnc)
   03009 Ribosome biogenesis [BR:twan03009]
    HUF19_05360 (rnc)
   03036 Chromosome and associated proteins [BR:twan03036]
    HUF19_05360 (rnc)
Enzymes [BR:twan01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HUF19_05360 (rnc)
Messenger RNA biogenesis [BR:twan03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HUF19_05360 (rnc)
Ribosome biogenesis [BR:twan03009]
 Eukaryotic type
  90S particles
   RNase
    HUF19_05360 (rnc)
 Prokaryotic type
  rRNA processing factors
   HUF19_05360 (rnc)
Chromosome and associated proteins [BR:twan03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HUF19_05360 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: UXD86907
UniProt: A0ABY6A8C8
LinkDB
Position
1211570..1212286
AA seq 238 aa
MNNPLVKLSQRLGYNFRDESLVMLALTHRSKGISNNERLEFLGDSILNFVVAEDLYRRFP
QAKEGKLSRLRARMVKGETLAVIAREFDLGDFLLLGSGELKSGGHRRESILADTVEALIG
AMYLDSGLDVARERILSWYATRLDALTLEDPIKDPKTRLQEYQQGRKSSLPKYEVLSVEG
PTNEQVFTVECRIPELADAIVALGSSRRGAEQSAAAQVLTILGIDESAEPAHDAGEEE
NT seq 717 nt   +upstreamnt  +downstreamnt
gtgaataatcccctcgttaaattatctcagcgcctgggctataacttccgcgatgaatcg
ctggttatgctggcgctgacacaccgcagtaaaggcatcagtaacaatgagcggctggag
tttctcggcgactctattctgaattttgtcgtcgctgaagatttataccgccggtttcct
caggctaaagaaggcaagctgagtcgcctgcgcgcgcgcatggtaaaaggcgagacgctg
gcggtgattgcccgtgaatttgatctcggtgattttctgttactcggctcaggtgaatta
aaaagtggtggtcaccgtcgtgaatccattctggccgataccgttgaagccttaattggt
gccatgtatctggactctggcctggacgtcgcccgcgagcgcattctgtcctggtacgct
acccgtctggatgccttaacgctggaagatccgattaaagatccgaagacccgtctgcag
gaataccagcaggggcgtaaatccagcctgccgaaatatgaagtcctgagtgttgaaggc
ccgaccaacgagcaggtatttaccgtcgagtgccgcattcctgaactggctgatgccatt
gttgccctgggcagcagccgccgtggtgccgagcaaagcgccgccgctcaggttctgact
atactgggcattgatgaatcagcagagcctgcgcatgacgcaggagaggaagaataa

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