Thalassolituus hydrocarboniclasticus: HUF19_06230
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Entry
HUF19_06230 CDS
T08537
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
twan
Thalassolituus hydrocarboniclasticus
Pathway
twan03030
DNA replication
twan03430
Mismatch repair
twan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUF19_06230
03430 Mismatch repair
HUF19_06230
03440 Homologous recombination
HUF19_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twan03032
]
HUF19_06230
03400 DNA repair and recombination proteins [BR:
twan03400
]
HUF19_06230
Enzymes [BR:
twan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUF19_06230
DNA replication proteins [BR:
twan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUF19_06230
DNA repair and recombination proteins [BR:
twan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUF19_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UXD87064
UniProt:
A0ABY6A7Z6
LinkDB
All DBs
Position
1412326..1412940
Genome browser
AA seq
204 aa
AA seq
DB search
MAPFWLLKKLPGYMPPQGRWRHLAEPYDGDEVVVLDCETSCFDKKKGELLSVAAVRVKGG
EIRLSEALDLTINSNAVTDPNAVRVHYLRREDRRQGVAVSEAIEKVLDFVGNRPICGFYI
EYDRAILNRYIKQLHNFQLPNRFIEVSELYVRQKRKYIPELQLDLTFEGLAKDLKVPIIE
RHTAMGDVISTALMYIKLTHFPRK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcacctttctggttgctgaaaaaactaccgggctatatgccgccacaagggcgctgg
cgtcacctggcggagccttatgatggcgatgaagtggtggttctggattgtgaaaccagc
tgctttgataagaaaaaaggcgagctgctgagtgtggctgcggtacgggtaaaaggcgga
gaaatccgtttgtccgaagccctggatctgaccattaattctaatgcggtaaccgacccg
aacgcagtgcgggtgcattatctgcggcgtgaagaccggcgtcagggcgttgccgtttca
gaagcgattgaaaaggtactggattttgttggtaaccggccgatttgtggcttttatatc
gaatacgaccgggcgattctgaatcgttatattaaacagctgcataactttcagctgccg
aaccgctttatcgaagtatcggagttgtatgtgcgccagaaacgcaaatacattccggag
ctgcagctcgatctgacctttgaagggctggcgaaagatctgaaagtccccattattgaa
cgtcataccgcgatgggcgatgttatttccaccgcactgatgtatatcaaactgacccac
ttcccgcgtaaataa
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