Thalassolituus hydrocarboniclasticus: HUF19_06880
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Entry
HUF19_06880 CDS
T08537
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
twan
Thalassolituus hydrocarboniclasticus
Pathway
twan02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
twan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HUF19_06880 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
twan02000
]
HUF19_06880 (choW)
Transporters [BR:
twan02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
HUF19_06880 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UXD87177
LinkDB
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Position
1578326..1579156
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AA seq
276 aa
AA seq
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MDSFKIPLGEYIELFFDWLVDNTSGFFDAMAESLEWLINSSTDALTWMHPGIFIAVLALF
AFWLHRSFGLVAYAVLSLLLIWNMGYWIETMQTLSLVLYATLFCILLGLPIGIYAAHNPR
LYTLLRPVLDLMQTVPPFVYLIPTLTLFGLGVVPGLISTIIFAIAAPVRLTYLGISEVPK
EMVEAGQSFGATRSQLLWRIELPAAASNIAAGVTQCIMLSLSMVVIAALVGADGLGKPVV
RALNTVDIASGFEAGLAIVLLAILLDRLCKQREQVS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggatagttttaaaattccactcggtgaatatatcgagctgtttttcgactggttggtg
gacaacacctccggtttctttgatgccatggccgaatcactggaatggctgattaattcc
agcactgatgcgctgacctggatgcatcccggtatttttattgcggttctggcgctgttt
gcattctggctgcaccgctctttcgggttggtcgcttatgcggttctatcactgttactg
atctggaatatgggttattggatcgaaaccatgcagaccctgtctctggttctgtatgcc
actctgttctgcattttactgggtttaccgatcggtatttatgctgctcataacccgcgt
ttatatactttgttgcgcccggtgcttgatctgatgcaaaccgttccgccctttgtatat
ttaattccaaccctgacattgtttggtcttggtgttgttcccgggctgatttccaccatt
atttttgctattgccgcaccggtacgtctgacctatctggggatttctgaagtgccgaaa
gaaatggttgaggcaggccaatcctttggtgcgacccgctcacaattattatggcggatt
gaattaccggcggcggcctccaacattgccgccggtgtaacccagtgcattatgttgtcg
ctgtcgatggtggtgattgcggcgctggttggtgctgatggcttaggtaaacctgtggtc
cgggcgctgaacacggtagatattgccagcggttttgaagcgggactggccattgttctg
ctggcgattttactcgatcgcctgtgcaaacaacgggagcaggtgagctga
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