Thalassolituus hydrocarboniclasticus: HUF19_09670
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Entry
HUF19_09670 CDS
T08537
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
twan
Thalassolituus hydrocarboniclasticus
Brite
KEGG Orthology (KO) [BR:
twan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twan03009
]
HUF19_09670 (rimO)
Enzymes [BR:
twan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HUF19_09670 (rimO)
Ribosome biogenesis [BR:
twan03009
]
Prokaryotic type
ribosomal protein modification factors
HUF19_09670 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UXD87682
UniProt:
A0ABY6AAK2
LinkDB
All DBs
Position
complement(2201269..2202612)
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AA seq
447 aa
AA seq
DB search
MSDGKLSSGKVGFVSLGCPKALVDSEKILTQLKMDGYEVVNSYDNADVVVVNTCGFIDAA
KQESLDAIREAMTENGKVIVTGCMGKGKDAETIKELNPGILAVTGPQAYEEVMTAVHEWV
PPVSQEHNPFTDLVPPQGVKLTPRHYSYLKISEGCNHSCTFCIIPDMRGKHVSRPIGDVL
DEAKRLVAAGTRELLVISQDTSAYGVDLKYRTGFWDGKPVKTKLYDLCKELGELGAWVRL
HYVYPYPSVDDIMPLMAEGKILPYLDIPFQHASPRILKLMKRPAHAENTLERIHKWRAQV
PDLVIRSTFVVGFPGETEEDFQMLLDWLEEAELDRVGCFKYSPVEGAKANDLPDHVPEEI
QQERFDRFMQAQQAISARKLQRKIGSRMTVIIDEVDEEGAVARSAADAPNIDGMVYLNDF
FDCQPGDFVEVEIEHADEYDLWASPVA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatggcaaattgtcttccggcaaagtcggttttgtatctcttggctgccccaaa
gcgctggtggattctgaaaagatcctgacccagctgaaaatggatggctacgaagtcgtc
aacagctacgacaacgccgacgtggtggtggtgaatacctgtggttttattgatgccgcc
aagcaggagtcgctggatgccattcgcgaggccatgaccgaaaacggcaaggtgatcgtg
accggctgcatgggtaagggcaaagatgccgagaccatcaaagagctgaaccccggcatt
ctggctgttaccggcccgcaggcctatgaagaagtgatgaccgctgtacacgagtgggtg
ccgccggtttcacaggaacataacccctttaccgatctggtgccgccgcagggtgtgaag
ctgactccgcgtcattactcttacctgaagatttccgaaggctgtaaccacagctgtacc
ttctgcattatcccggatatgcgcggcaagcatgtcagccgtccgatcggtgatgtactg
gacgaagccaagcgtctggtggcggcgggtacccgtgagctgctggtgatttcgcaggac
acctcggcgtatggcgtcgatctgaaataccgtaccggtttctgggacggtaagccggtt
aaaaccaagctctacgatctgtgcaaagagctgggtgaactgggtgcctgggtacgtctg
cactatgtgtacccatacccaagtgtcgatgacattatgcctttgatggccgaaggcaaa
atcctgccgtatctggatatcccgtttcagcacgccagtccgcgtattctgaaactgatg
aagcgtccggcccatgctgagaacacgctggagcgtatccataaatggcgcgcccaggtg
ccggatctggtgatccgttccacctttgtggtcggcttccccggtgaaaccgaagaagac
ttccagatgctgcttgactggctggaagaagcggagctcgaccgcgtaggctgctttaaa
tacagtccggtggaaggtgcgaaggccaacgatctgccggaccatgtgccggaagaaatc
cagcaggagcgtttcgaccgctttatgcaggcacagcaggccatcagtgcgcgtaagctg
cagcgtaaaatcggcagccgcatgacggtcatcattgatgaagtggacgaagagggtgcg
gttgcccgttctgccgccgatgcgccgaacattgacggtatggtgtatctgaacgatttc
ttcgattgccagccgggcgattttgttgaggttgaaatcgagcacgccgacgaatatgac
ctgtgggcatcaccggtcgcctga
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