Thalassolituus hydrocarboniclasticus: HUF19_12630
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Entry
HUF19_12630 CDS
T08537
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
twan
Thalassolituus hydrocarboniclasticus
Pathway
twan02020
Two-component system
twan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
twan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HUF19_12630
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HUF19_12630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twan03021
]
HUF19_12630
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
twan02035
]
HUF19_12630
Transcription machinery [BR:
twan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUF19_12630
Bacterial motility proteins [BR:
twan02035
]
Flagellar system
Flagellar assembly proteins
Stator
HUF19_12630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
UXD88216
UniProt:
A0ABY6AB15
LinkDB
All DBs
Position
complement(2829944..2830675)
Genome browser
AA seq
243 aa
AA seq
DB search
MSVGSCLVYSDVQKHDYEQLVREHATLVKRIAHHLIGRLPDSVQLDDLIQAGMIGLLEAA
RKYDGGKGASFETYAGIRIRGAMLDEIRKGDWAPRSVHRNSRRISEAIKQIESAKGRDAE
DSEVAGFLGISQDEYHAILKDSAGCRLFSFEEVVEKSESGFDVFEDESPNPLDGIERESF
QRQLADAIRHLPEREQLVLALYYDEELNLKEIGAVLGVSESRVSQLHSQAAHRLRARLGG
WLS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagtaggaagttgtctggtgtattccgacgtacaaaaacacgattatgaacaactg
gtgcgtgagcatgcgacgctggtaaagcgtattgctcaccatcttatcggccgcctgcct
gacagcgtgcagctcgatgaccttattcaggccggtatgattggcttgctggaggctgca
cgtaaatacgacggtggcaagggtgccagttttgaaacctacgccggtatccgcatccgt
ggtgccatgctggatgaaatccgcaaaggtgactgggcaccacgctcggttcaccgcaat
tcccgccgtatcagtgaagccattaaacagatcgaaagcgcaaaaggccgtgatgctgaa
gacagcgaagtcgcgggctttcttggcatcagtcaggatgaataccacgcgattctgaaa
gacagtgccggctgtcggctgttcagctttgaagaggttgtggagaagagcgaatcaggc
ttcgatgtctttgaggatgaatctccgaatccactggatggcatcgagcgtgagtccttt
cagcgtcaactcgccgacgctatccgtcatttacccgaaagagagcaactggtactcgca
ctctactatgacgaagaactgaatctgaaagaaattggcgctgtgctgggtgtcagtgaa
tcaagggtcagtcagctgcacagtcaggcagctcatcgcctgcgtgcccgtcttggcggc
tggttgtcctaa
DBGET
integrated database retrieval system
