Thalassolituus hydrocarboniclasticus: HUF19_12805
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Entry
HUF19_12805 CDS
T08537
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
twan
Thalassolituus hydrocarboniclasticus
Pathway
twan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
twan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUF19_12805 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twan03400
]
HUF19_12805 (ung)
Enzymes [BR:
twan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HUF19_12805 (ung)
DNA repair and recombination proteins [BR:
twan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUF19_12805 (ung)
Prokaryotic type
HUF19_12805 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UXD88248
LinkDB
All DBs
Position
complement(2867011..2867688)
Genome browser
AA seq
225 aa
AA seq
DB search
MGKAGELHPSWQAVLGSELEQPYMHNLREFLKAEKAAGKVIFPPGPQIFNAFNHTPFQQV
RVVIIGQDPYHGPGQAHGLSFSVQPGVKIPPSLVNIFKEIEGDLGLHMSGSGDLTPWADQ
GVLLLNATLTVEQANAGSHQGKGWEQFTDAAIRALNEQREGLVFVLWGSYAQKKGAVIDP
QKHLVLKSVHPSPLSAHRGFFGNHQFSRINDYLISRGEAPIQWQL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagccggagaattacatccatcctggcaggcagtgcttggttctgaactggag
cagccttatatgcataatctgcgcgaatttctcaaggcagagaaggcggcgggtaaggtt
atttttccaccgggtccgcagatttttaatgcctttaatcacacgccctttcagcaggtg
cgtgtggtgattattggtcaggacccgtaccacggtccggggcaggctcatggtttaagt
ttttcggtgcagcctggggtaaaaattccaccgtcgctggtgaatatttttaaagaaatt
gaaggtgaccttggtctgcatatgagtggcagtggtgatctgaccccgtgggctgatcag
ggcgttttattattgaatgcaacgctgacggtggaacaggccaatgccggatcacatcag
ggcaaaggctgggagcaatttaccgatgcggctatccgtgcactgaatgaacagcgagaa
gggttggtatttgtactctggggcagttatgcgcagaaaaaaggtgccgtcattgatccg
cagaaacacctggtgctgaagtcggtgcatccttcaccgttatccgcgcaccgcggattt
ttcgggaatcaccagttttcacgtattaacgattaccttatttcccgtggtgaagcaccg
atacagtggcagctgtaa
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