Thalassolituus hydrocarboniclasticus: HUF19_13555
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Entry
HUF19_13555 CDS
T08537
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
twan
Thalassolituus hydrocarboniclasticus
Brite
KEGG Orthology (KO) [BR:
twan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twan03016
]
HUF19_13555 (truB)
Enzymes [BR:
twan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HUF19_13555 (truB)
Transfer RNA biogenesis [BR:
twan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HUF19_13555 (truB)
Prokaryotic type
HUF19_13555 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UXD88390
UniProt:
A0ABY6AEX9
LinkDB
All DBs
Position
complement(3048411..3049355)
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AA seq
314 aa
AA seq
DB search
MARGKKGRAVSGILVVNKPLGLSSNQVLQRVKFLFGAQKAGHTGALDPLATGVLPICLGE
ATKFSQLLLESDKGYDTTALLGEIRSSGDGEGEVIATAEVPPLTNAEVEAVLDRFRGAVE
QVPPMFSALKLDGKPLYELARQGMSEEDIRAVAEKKRRIITIYELLLREQRATELDLSVR
CSKGTYIRTLVEDIGQAIGCGAYVSKLHRTLCGPYHAGQMVTLEQVQEAAEQGHDALDAL
LLPTETALPDWPEVALTLAEADKILHGQPVSTGLPASPSVQLWAVESGVRQLLGIGRIEE
GKVKPQRLLQVTLP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtggaaaaaaaggccgtgcggtcagcggcattctggtggtcaataagccgctg
ggactgtcttccaatcaggtgctgcaacgggtgaaattcctgttcggcgcccagaaagcc
gggcataccggtgctttggacccgctggccaccggcgtactgccgatctgcctgggcgag
gcgaccaagttttcacagctgttgctggagtctgacaaaggctacgacaccaccgcgctg
ctgggcgaaatccgctccagcggtgacggcgaaggcgaggtgattgcgaccgccgaagtg
ccgccgctgactaacgccgaagtggaagcggtgctcgatcgtttccgtggcgctgtcgag
caggtgccgccgatgttttcagcgctgaagctcgatggcaagccgctgtatgagctggcg
cgtcagggtatgagtgaagaagatatccgtgcggtcgctgagaaaaagcgccgcatcatc
accatctatgaactgctgctgcgcgaacagcgtgccaccgagctggatctgtcggtgcgt
tgctcaaaaggcacctatatccgcacactggtggaagatatcggtcaggcgattggttgc
ggcgcttatgtcagtaagctgcaccgcactctctgcgggccttaccatgcagggcagatg
gtcacgctggagcaggtgcaggaagcggctgaacagggacatgacgcactggatgcgtta
ctgctgccgaccgaaaccgctttgcccgactggccggaagtggctctgacactggcggaa
gcggataaaatcctgcatggacagccagtcagtactggcctgcccgccagtccttctgta
caattgtgggccgttgaatcaggcgtccggcaattgcttggcattggccgcattgaagaa
ggcaaggtaaaaccacagcgtttgctgcaggtaacactgccttaa
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