Thalassolituus hydrocarboniclasticus: HUF19_15915
Help
Entry
HUF19_15915 CDS
T08537
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
twan
Thalassolituus hydrocarboniclasticus
Pathway
twan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
twan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUF19_15915 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twan03021
]
HUF19_15915 (rpoA)
03400 DNA repair and recombination proteins [BR:
twan03400
]
HUF19_15915 (rpoA)
Enzymes [BR:
twan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HUF19_15915 (rpoA)
Transcription machinery [BR:
twan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUF19_15915 (rpoA)
DNA repair and recombination proteins [BR:
twan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUF19_15915 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
DUF7026
Motif
Other DBs
NCBI-ProteinID:
UXD88833
UniProt:
A0ABY6AE34
LinkDB
All DBs
Position
complement(3571827..3572828)
Genome browser
AA seq
333 aa
AA seq
DB search
MQRAVNEFLTPRHIQVDEVNNTHAKVTLEPLERGFGHTLGNALRRILLSSMPGAAIVECE
IDGVLHEYSAIEGVQEDVIEILLNLKGVAVKLHERDEAILSLAKVGPATVTAADIQLDHG
VEVANPAHVIAHLGEGAELKMTLKVASGRGYETVESRNQNDEETKAIGKLQLDATYSPVK
RVSYSVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRSATILQQQLAIFVNLENDEVVE
QIREEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMHLENWPPASLRNDDKVLA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtgcagttaatgaatttttgacacctcgtcacatccaggtggatgaggtaaac
aatacccacgctaaagtgactctggagccgcttgagcgcggtttcggccacactttaggc
aacgcattgcgtcgtatcctgctttcctctatgccgggcgctgcaatcgttgaatgcgaa
atcgatggcgttctgcatgagtacagcgcgatcgaaggtgtacaggaagacgtaattgaa
atcctgctgaacctgaaaggtgttgcggtcaaattacatgaacgtgacgaagcgattctg
agcttggcgaaagttggcccggcaacagtaacagctgccgatattcaactggatcatggt
gttgaggttgctaacccagctcacgttatcgcccatctgggtgaaggcgctgaactgaaa
atgaccctgaaagttgcttccggtcgtggctacgagactgttgagtcccgtaaccagaac
gatgaagaaaccaaggccattggcaaactgcagcttgatgctacctacagcccggttaag
cgtgtttcttacagcgttgaaagcgctcgtgtggaacagcgtaccgatctggacaaactg
gttatcgatctcgaaaccaacggtaccatcgatccggaagaagcgatccgtcgttccgcg
accatcttgcagcaacagctggctatcttcgtaaatctggaaaacgacgaagtcgttgaa
cagatccgcgaagaagaagagatcgatccgattctcctgcgtcctgtggacgatctggag
ctgaccgttcgttctgccaactgtctgaaagcagaaaacatttactacatcggtgatctg
atccagcgtacagaagtagagctgttgaagactcctaatttaggtaagaagtctctgact
gaaatcaaagacgttctggcctcacgcggactgtcgttgggaatgcatctggagaactgg
ccacctgccagcctccgtaacgacgacaaagtattagcctga
DBGET
integrated database retrieval system
