Thiorhodovibrio winogradskyi: Thiowin_00407
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Entry
Thiowin_00407 CDS
T09736
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg00362
Benzoate degradation
twg00620
Pyruvate metabolism
twg00650
Butanoate metabolism
twg01100
Metabolic pathways
twg01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Thiowin_00407 (gcdB)
00650 Butanoate metabolism
Thiowin_00407 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Thiowin_00407 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
twg02000
]
Thiowin_00407 (gcdB)
Enzymes [BR:
twg01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Thiowin_00407 (gcdB)
Transporters [BR:
twg02000
]
Other transporters
Primary active transporters [TC:
3
]
Thiowin_00407 (gcdB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
OAD_beta
LSDAT_prok
Motif
Other DBs
NCBI-ProteinID:
WPL15508
UniProt:
A0ABZ0S5G1
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All DBs
Position
389643..390776
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AA seq
377 aa
AA seq
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MEELLKLWASMGIANLTWGQVLMMAVAGGLIYLAIAKKFEPLLLVPIGFGALLSNIPVAN
IGGPDGMIGQIYTVGVETGIFPLLIFMGVGALTDFGALIARPSTLLLGAAAQFGIFATLL
GAVALNFLPGFNFSLQDASAIAIIGGADGPTAIFLASRLAPDLLGAIAVAAYSYMALVPI
IQPPIMRLLTTKEERAVVMQQLRPVSRLERMLFPFVVLLLCAMLLPSAAPLIGMLTFGNL
LRECGVVERLSRAAQNEIINIVTIMLGLAIGSKLSADMFLTLETLGILALGALAFSIGTA
AGVLMGKIMHRVTGGKVNPLIGAAGVSAVPMAARVVNRVGLEENHQNFLLMHAMGPNVAG
VIGSAVAAGVLLALTGS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaattgctcaaactctgggcgtccatgggcatcgccaacctgacctggggtcag
gtgctgatgatggcggtggcgggcggcttgatctatctcgcgatcgcgaaaaagttcgag
ccgttgctgctggtccccatcggttttggcgcgctgctgagcaacattccggtggccaat
attggtgggccggatgggatgatcgggcagatctacaccgtcggcgtcgagaccggcatc
tttccgctgctaattttcatgggggttggcgccctgaccgacttcggtgccctgattgct
cgcccctcgaccctgctgctgggcgcggcggcgcagtttggcatcttcgccaccctgctg
ggagcggtggcgctgaactttctccccggctttaacttcagcctccaggatgcctcggcc
attgccatcatcggcggtgccgatgggcccacggctattttcctcgcctcgcgattggcg
cccgatttgcttggagccattgccgtggccgcctattcttacatggcgctggtgcctatc
attcagccacccatcatgcgccttctcaccaccaaggaagaacgtgccgtggtcatgcag
cagttgcggccggtgtcgcgtttggaacgcatgctgtttccctttgtggtgctgctgctg
tgcgccatgctgctgccctcggcggctccgctcatcggtatgctcacctttggcaatctg
ctgcgtgaatgcggcgtggtcgagcgcctgagccgcgctgcccagaatgaaattatcaac
atcgtcaccatcatgcttggcctggcgatcggctccaagctgtcggcggacatgttcctg
acgctcgagaccctgggcattctggcgcttggcgccctggccttctcgatcggcaccgcg
gccggcgtgctcatgggcaagatcatgcaccgggtgaccggcggcaaggtcaatccgctc
atcggtgccgccggtgtgtcggccgtgcccatggcggcacgggtggtcaatcgcgtcggg
ctggaagaaaatcatcagaacttcctgctgatgcatgccatggggccaaatgtggcgggt
gtcattggctcggcggtggcggctggggtgctgctggcgctgaccgggagttga
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