Thiorhodovibrio winogradskyi: Thiowin_00483
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Entry
Thiowin_00483 CDS
T09736
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03420
Nucleotide excision repair
twg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thiowin_00483 (uvrD)
03430 Mismatch repair
Thiowin_00483 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twg03400
]
Thiowin_00483 (uvrD)
Enzymes [BR:
twg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thiowin_00483 (uvrD)
DNA repair and recombination proteins [BR:
twg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thiowin_00483 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Thiowin_00483 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
WPL15581
LinkDB
All DBs
Position
473639..475798
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AA seq
719 aa
AA seq
DB search
MDVSRILDPLNPAQREAVSASGGNVLVLAGAGSGKTRVLVHRIAWLLRVEGLQPWAVLAV
TFTNKAAREMRSRIEEMLEQPVGGMWVGTFHGLAHRFLRAHWQDAKLPQQFQILDSDDQF
RLIKRILKTLELDEARWPPRQIQGYINKHKDEGRRAGHLDDGGDFYEQQLIRVYRDYEDA
CARGGLLDFADLLLRTHELLRERPDILHHYRTRFGALLVDEFQDTNAIQYAWLRLLSGDK
DNLFLVGDDDQSIYGWRGARVENIQSFQRDYPNTQVVRLEQNYRSSGNILAAANALIANN
PTRLGKELWTEDSAGEPVRLYSAFNEIDEARFVAERVRRGCAEEGMRRSECAILYRTTAQ
SRLFEEALMQLGLPFRVYGGQKFFERAEIKDALAYLRLLANPDDDAACERVLNVPARGIG
TRTVEILRDHARAARCSLWRAAGDALGSQLLPARATGALRQFIDLIRAMQQANQDQSLAD
LTLQTIDASGLPAHYEKAKDGRGIDRLENLEQLVEAARRFEGELEDDNADPLGSFLAHAA
LEAGEGQADGHEDAVQLMTLHSAKGLEFPLVFVTGVEEGLFPHSMSADDPDRLEEERRLC
YVGMTRAMQQLYLTHAESRRLHGREEYPMPSRFLREVPVALIEEVRAHGGQRRPGPVLGG
APTAGGFHLGEQVVHPKFGTGVVLNSEGAGASARIQVNFEAVGQKWLVLAYARLERAAG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcacgaattctcgatcccctaaaccccgcccaacgcgaggcggtgtccgcc
agtggcggcaatgtgctggtcctggccggcgccggctcgggcaagacccgggtgctggtg
catcgcatcgcctggctgctgcgggtggagggtctgcagccctgggcggtgctagcggtc
accttcaccaacaaggctgcgcgggagatgcgctcgcgtatcgaggagatgctcgagcaa
ccggtcggcggcatgtgggttggcaccttccatggtctggcgcatcggttcctgcgcgcg
cactggcaggacgccaagctaccgcagcagttccagattctcgactcggacgatcagttc
cggctcatcaaacgcatcctcaaaacgctcgagctggacgaggcacgctggccgccccgc
cagattcagggctacatcaacaagcacaaggacgaggggcgccgcgctggtcatctcgac
gatggcggggatttttacgaacagcagctcatccgcgtctatcgcgactatgaagacgcc
tgcgcgcgcggcggtctgctcgattttgccgatttgctgctgcgcacccatgagctgctg
cgcgagcgaccggacatcctgcaccattatcgcacgcgttttggcgcgctcctggtcgat
gagttccaggacaccaatgccattcaatacgcctggctgcgactgctgagcggcgacaag
gacaacttgtttctggtcggcgacgatgatcagtccatctatggctggcgtggcgcgcgg
gtggaaaatatccagagctttcagcgcgattatcccaacacccaggtggtgcgcctggag
caaaactatcgctccagcggcaatattctggccgccgccaacgcgctcatcgccaataat
cccactcgtctgggcaaggaactctggaccgaggacagcgccggcgagccggtgcgtctg
tattcggccttcaatgaaatcgacgaggcgcgctttgtcgccgagcgcgtgcgccgtggt
tgtgccgaggagggcatgcgccgctcggaatgcgccatcctttatcgcaccacggcccag
tcgcgcttgtttgaagaagccctgatgcagctcggcctgccgtttcgcgtctatggcggg
cagaaattcttcgagcgcgccgagatcaaggatgcgctcgcctatctgcgcctgctggcc
aaccccgatgacgatgccgcctgcgagcgggtgctgaacgtgccggcgcgcggcattggg
acccgcacggtcgagatattgcgcgatcatgcgcgcgcggcgcgctgctccctgtggcgg
gcggcgggcgacgccctgggcagccagttgctgccggcgcgcgcgactggggcgctgcgg
cagttcatcgacttgatccgcgccatgcagcaggcgaaccaagaccagtcgctggcggat
ttaaccttgcagaccatcgatgccagcggcctgccagcccactacgaaaaagccaaggac
gggcgcgggatcgaccggcttgaaaacctggagcagctggtcgaggcggcgcgtcgtttc
gagggcgagctcgaggacgataacgccgatccgctcggcagctttctggcgcacgccgcg
ctcgaggccggcgagggccaggccgacggccatgaggacgcggtgcagttgatgaccctg
cacagcgccaaggggttggagtttcccctggtcttcgtcacgggcgtggaggaggggctg
ttcccgcacagcatgtcggcggatgatcccgaccggctcgaggaagaacgccgcctgtgc
tatgtcggcatgacccgcgccatgcagcagctgtatcttacccatgccgaaagccgccgc
ctgcatgggcgcgaggagtatcccatgccctcgcgcttcctgcgcgaggtgccggtggcg
ctgatcgaagaggtgcgcgcccatggcggtcagcggcgcccggggccggtgctcggtggc
gcgccaacggcgggcggctttcacctcggggagcaggtggtgcatcccaagttcggcacc
ggcgtcgtactcaatagcgagggcgctggcgccagcgcgcgtattcaggttaatttcgag
gccgtggggcaaaaatggttggtgctggcttacgctcgtcttgagcgtgccgcaggatga
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