Thiorhodovibrio winogradskyi: Thiowin_00880
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Entry
Thiowin_00880 CDS
T09736
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03030
DNA replication
twg03430
Mismatch repair
twg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thiowin_00880 (polC)
03430 Mismatch repair
Thiowin_00880 (polC)
03440 Homologous recombination
Thiowin_00880 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twg03032
]
Thiowin_00880 (polC)
03400 DNA repair and recombination proteins [BR:
twg03400
]
Thiowin_00880 (polC)
Enzymes [BR:
twg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thiowin_00880 (polC)
DNA replication proteins [BR:
twg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thiowin_00880 (polC)
DNA repair and recombination proteins [BR:
twg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thiowin_00880 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
CAF1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WPL15950
UniProt:
A0ABZ0S4F5
LinkDB
All DBs
Position
complement(953014..953697)
Genome browser
AA seq
227 aa
AA seq
DB search
MNNDVLLEARRRWTIYNLPFGALRDCYAQPLPRARQEYRDTDYVALDFETTGLYPVKDQI
LSFGWVPIDGNRIRLDGAQHRMIKVDQAISAESAVIHQITDDQAARGEPLKEVLTDFLRV
LGGRVLVAHHARIERGFLAAACRDFFGDEPLVRVVDTEALARRSLERRQQAYRPSDLRLH
ALAQSYNLPQMTAHNALSDALNTAQVFLAQIAYLDTGKSLRLQDLLT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgacgtcctgctcgaagcccgccgccgctggaccatttacaacctgcccttc
ggggcgctgcgcgattgttatgcgcagccactcccgcgtgctaggcaagaatatcgcgat
actgattatgtggcgctcgatttcgagacaaccggcttgtatcccgtcaaagaccagatt
ctcagctttggctgggtgccgatcgatggtaatcgcattcgcctggatggagcccagcac
cgaatgattaaagtcgatcaggctatttcagccgaaagcgcggtgattcatcagatcacc
gatgatcaggccgcgcgcggcgaaccccttaaagaggtgcttaccgactttttgcgcgtt
ctcggcggccgggttttggtggcccatcatgcgcgcattgagcgtggctttctcgccgcc
gcctgtcgcgatttttttggcgatgagcctcttgtgcgcgtggtggacaccgaggctctt
gccagacgcagcctggaacgccgccagcaggcctaccgaccctctgatcttcgtctccat
gcgctggcccagagctataacctgccgcaaatgaccgcgcacaatgcgctctccgacgca
ctgaacaccgcgcaggtgttcctcgcccagatcgcctatctcgataccgggaaatccctg
cggctacaagatttactcacctga
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