Thiorhodovibrio winogradskyi: Thiowin_01203
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Entry
Thiowin_01203 CDS
T09736
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thiowin_01203 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twg03019
]
Thiowin_01203 (pnp)
03016 Transfer RNA biogenesis [BR:
twg03016
]
Thiowin_01203 (pnp)
Enzymes [BR:
twg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Thiowin_01203 (pnp)
Messenger RNA biogenesis [BR:
twg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Thiowin_01203 (pnp)
Transfer RNA biogenesis [BR:
twg03016
]
Prokaryotic type
tRNA degradation factors
Thiowin_01203 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
RNase_II_C_S1
S1_RRP5
KH_KhpA-B
S1_2
Motif
Other DBs
NCBI-ProteinID:
WPL16250
UniProt:
A0ABZ0S5C7
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All DBs
Position
1269713..1271821
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AA seq
702 aa
AA seq
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MTHIIKSFQYGDQTVTLETGEIARQADGAVMVNMNDTVVLVTVVIDKRATVEKDFLPLTV
DYQEKTYAAGRIPGGFFRREGRPSEAEILTSRLIDRPIRPLFSAGFGREVQVIATVKSLN
PAVNPEVPALIGASAALAISGAPFNGPIGAARVGYKNGEYLLNPAMIGLTPDSDLDLVVA
GTEQAVLMVESEARGLSEDVMLGAVLFGHEQMQVVIQTIKELAAEVNKPPLEWTPAATDP
ELAQAVAAQAADGLGEAYRIKDKMERYRALDQVRNAVYAELCGEDEKWPQPLVYAALEKL
EKAIVRGRILRGEPRIDGRDTKTVRPISIRTGVLPRTHGSALFTRGETQALVVTTLGTER
DSQIIDALDGERREAFMLHYNFPPFCVGETGRVGSPKRREIGHGRLAKRGVLAAMPSIEE
FPYSVRVVSEITESNGSSSMASVCGTSLSLMDAGVPVKGSVAGVAMGLIKEGTDFAVLTD
IMGDEDHLGDMDFKVAGTAEGINALQMDIKIEGITREIMQQALAQAKDGRMHILGEMNKV
IDHHRSEMSEHAPRIIEFKIHPEKIRDVIGKGGSTIRAITEETGATIDINDEGVVKIFSV
QKSAGEEAKKRVRLITADVEVGKIYEGKVARLMDFGAFVTILPGRDGLVHISQICEERVQ
SVSDKLSEGDHVRVKVLEVDKQGRIRLSMKALTDEERAAPVE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgactcatatcatcaagtccttccagtacggcgatcagaccgtcaccctcgaaaccggc
gaaatcgcccgtcaggccgatggcgccgtcatggtcaatatgaatgacaccgtggtgctg
gtcaccgtggtgatcgacaaacgtgcgactgttgaaaaagactttctgccgctgaccgtc
gattatcaggaaaaaacctatgccgccgggcgcatcccaggcggcttttttcggcgtgaa
ggtcgcccgagcgaggccgagattctgacctcgcgcctgatcgaccgtcctatccgccca
ttgttctccgctggctttggtcgtgaggtgcaagtgatcgccacggtcaaatcgctcaat
ccggcggtcaatcccgaggttcccgcactcatcggtgcctctgccgcgctggccatctct
ggcgcgcccttcaatggacccatcggtgccgcgcgcgtcggctacaagaatggggaatac
ctgctgaatccggccatgatcggcctgacgccggacagcgatctcgatctggtggttgcc
ggcaccgaacaagccgtgctgatggtggagtccgaggcgcgcggcctgtccgaggatgtc
atgctcggggctgtgctctttggtcatgagcagatgcaagttgttatccagaccatcaag
gaactggctgccgaggtcaataagccacccttggagtggaccccggcggcgaccgatccc
gagctggcgcaagcggtcgcggcccaggccgccgatggcctgggcgaggcctatcgcatc
aaggacaagatggaacgctaccgcgcgctcgatcaggtgcgcaacgccgtctatgccgag
ttgtgcggagaggatgaaaagtggccgcagccattggtctatgccgcgcttgagaagctc
gagaaagcaatcgtgcgcgggcgcattctgcgtggcgagccgcgcattgacgggcgtgac
accaagaccgtgcggccgatcagtattcgcaccggcgtgttgccacgcacccatggctcg
gcgctcttcacccgcggcgagacccaggcgctggtggtgaccacccttggaaccgagcgt
gattcgcagattatcgacgctctagatggcgagcggcgcgaagccttcatgctgcactat
aattttccgcctttctgcgtgggcgagaccggccgggtcggcagccccaagcggcgcgag
attggccatggacgtctggccaagcgcggcgtgctggcggccatgcccagcatcgaggaa
tttccctactcggtgcgggtggtctcggagattaccgagtccaatggctccagctccatg
gccagcgtttgcggcaccagtttgtcgctgatggacgcgggcgtgcccgtgaaaggctcc
gtggctggcgtggccatggggctgatcaaggaaggaacggacttcgccgtgctgaccgac
atcatgggcgacgaggatcatctcggcgacatggacttcaaggtggccggcaccgccgag
ggcatcaatgccctgcaaatggatatcaagatcgagggcattacccgcgagatcatgcaa
caggcgctggcccaagccaaggatgggcgcatgcacattctcggcgagatgaacaaggtc
attgaccaccatcgctccgagatgtccgagcatgcgccgcgcatcattgagttcaagatc
catccggaaaaaatccgcgatgtcatcggcaagggcggctccaccatccgcgccatcacc
gaggaaaccggagccaccatcgacatcaatgacgagggcgtggtcaagattttctcggtg
cagaaatccgccggcgaagaggcgaaaaagcgtgtccgcctgattaccgccgatgtcgag
gtcggcaagatctacgaaggcaaggtcgcgcgtttgatggactttggcgcctttgtgacc
atcctgccgggacgcgatggcctggtgcacatctcccagatctgcgaagagcgggtgcag
agcgtcagcgacaagctctccgagggcgaccatgtgcgggtcaaggtgctggaggtcgac
aagcagggccgcattcgtctgagcatgaaggcgctgaccgacgaggaacgcgcggcaccg
gttgagtag
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