Thiorhodovibrio winogradskyi: Thiowin_01272
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Entry
Thiowin_01272 CDS
T09736
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
twg
Thiorhodovibrio winogradskyi
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twg03400
]
Thiowin_01272 (phrB)
Enzymes [BR:
twg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Thiowin_01272 (phrB)
DNA repair and recombination proteins [BR:
twg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Thiowin_01272 (phrB)
Prokaryotic type
Thiowin_01272 (phrB)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPL16319
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All DBs
Position
complement(1352438..1353919)
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AA seq
493 aa
AA seq
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MASTAILWFRRDLRLSDNPALIAALDSYDRLLPVYIHAPGEDAPWSPGAASNWWLHHSLR
ALDVSLRERGSRLLLLSGDSLACLQALIATSTASAVFWNRCYEPVSIARDSRIKQQLRAQ
GIRCESHNSGLLFEPWQIKTTTDQPFRVFSAFWRRATARLADIPTPTPAPGILPPLPDGI
SSTDGRLSQSLPEQPLDALGLLPRIGWDAAFSDSWQPGAAGAQARLRRFFDQGAHDYAVV
RDQPSVAGTSKLSAHLHFGEISPRDLLQAANATAGDHEAFVRELGWREFSTHLLFHFPQT
AELPLNPMFDDFPWRDPIPPVLLQAWQRGQTGIPLIDAGMRELWHSGWMHNRVRMIVASF
LTKNLRIPWQTGARWFWDTLVDADLANNTQGWQWTAGSGADAAPYFRIFNPVRQGERFDP
EGGYVRHWCPELARLPNRYLHAPWTAPVGILQQSGVTLGLSYPHPLVDLADTRREALAFW
QQLRDTDSRANVG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaccgcaattttgtggtttcgccgcgatctgcggctgtcagacaatccggcc
ctgatagccgcgctcgatagctacgaccgcctgctgccagtctatatccacgcaccgggc
gaggacgccccctggtcaccaggggccgcctcgaactggtggctgcatcacagcctgcga
gccctggatgtatcactgcgcgagcgcggctcacgtctgttgctcctcagtggcgacagt
ctcgcatgtctgcaagcactcatcgccacctccacagcaagcgcggtgttctggaaccgc
tgctacgaaccagtcagcattgcgcgtgacagccgcatcaagcagcaactgcgcgcccag
ggcatccgctgcgaaagccacaatagcggtttattgttcgagccctggcagatcaaaacc
accacggatcagccttttcgggtcttcagcgctttctggcgacgcgcgacggcgagactc
gcggacattccaacgcccacgccagcacccgggatcttgccgccactccctgacgggatc
tcatcaaccgatgggcgcttgtcgcagtcgcttcccgaacagcccttggatgcgcttggc
ctgctcccgcgcattggctgggatgccgccttctcggacagctggcaaccaggtgccgct
ggcgcccaagcgcgtcttcggcgcttttttgaccaaggcgcgcatgactatgccgtggtc
cgcgaccagccaagtgttgcaggcacctccaagctctcggcgcatctgcatttcggcgag
ataagcccgcgtgacctgctacaggccgccaatgccacggctggcgatcatgaggctttt
gtgcgcgagcttggctggcgcgaattcagcacccatctgctgtttcattttccacaaact
gccgagttgccgctcaaccccatgttcgacgattttccctggcgcgatcccatcccgccc
gtgttactgcaagcttggcagcggggtcagaccgggattccgctcatcgatgccggcatg
cgcgagctttggcacagcggctggatgcacaaccgggtgcggatgattgtcgcttccttt
ttgaccaaaaacctgcgcattccctggcaaacaggcgcacgctggttctgggacacttta
gtggatgctgacttggccaacaacacccagggatggcagtggaccgccggaagcggagcc
gatgcagcgccctactttcgcattttcaatccggtgcgccagggcgaacgctttgacccc
gagggcgggtatgtgcgccattggtgcccagaactggcgcgtctgccaaaccgctatctg
catgccccttggacagcaccagttggtattttacaacagtctggcgtgacacttggcctt
tcttatcctcacccactggtcgatctagcggatactcgccgcgaagccttggcattttgg
caacagttgcgtgatactgacagtcgtgcgaatgtcggctaa
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