Thiorhodovibrio winogradskyi: Thiowin_01836
Help
Entry
Thiowin_01836 CDS
T09736
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thiowin_01836 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twg03019
]
Thiowin_01836 (rhlE)
Enzymes [BR:
twg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Thiowin_01836 (rhlE)
Messenger RNA biogenesis [BR:
twg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Thiowin_01836 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WPL16860
UniProt:
A0ABZ0S8K8
LinkDB
All DBs
Position
2008017..2009360
Genome browser
AA seq
447 aa
AA seq
DB search
MPFSHLGLSAELLRALVARGYTEPTPIQSQAIPAILAGRDVLAGAQTGTGKTAAFTLPLL
QRLSLSGQQANARSPRPRALVLTPTRELAAQVGESVNAYGQYLPLRALQIFGGVGMGPQI
TALRRGVDILVATPGRLLDHVGQGNLDLGQVELLVLDEADRMLDMGFMPAIRRVLKLLPA
KRQNLLFSATYSREIEQLATGLLNDPLRIEVARRNTAAETVRQLAHPVERGHKRALLSHL
ISSGGWDQTLVFTRTKHGANRLAQQLERDGISAAAIHGNKSQGARTRALADFKRGAVRTL
VATDIAARGLDIERLPHVVNFELPHVPEDYVHRIGRTGRAGESGTAVSLVSPEEGSLLAG
IERLLGRRIESQAIAGYSDRKASSASEDDFSDGRSRSHAPRQPRPGAAQAGHPRAHRQAS
GSAPAGAGAHGRKHSRARSSAAPRAVR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttcccatctcggcctatcggccgaattgctgcgcgccttggtggcgcggggc
tacaccgagcccacccccatccagagtcaagccattcccgccattcttgcgggccgcgat
gtgctggctggcgctcaaaccggcacgggtaagacggcggccttcaccttgccgttgttg
caacgtctgagcctcagcggccagcaagccaacgcccggtcgccgcgaccgcgtgctttg
gtactgacgccgacccgtgagttggccgcgcaggtgggtgagagcgtcaatgcctatggc
cagtatttgccattgcgcgccttgcagatttttggtggcgttggcatggggccgcaaatt
accgccttgcgccgtggcgttgatattttggttgccacccctgggcgcctgcttgatcac
gtggggcaaggcaatctagacttgggccaggtcgaactcttggtgcttgatgaagccgac
cgcatgctcgacatggggttcatgccagctattcgtcgggtgctcaagctgctgccagcc
aaacgccagaatttattgttctccgcgacttactcgcgcgagatcgagcagctcgccact
ggtctgctcaatgatcccttgcgcattgaggtcgcgcgccgtaacacggctgccgagacg
gtgcgccaacttgcccacccggttgagcgtggccacaagcgcgcgttgctgtcgcacctg
atttccagcggcggatgggaccagacgctggtgtttactcgcaccaagcatggcgccaac
cgactggcgcagcagcttgagcgtgacggcatcagtgccgcggccatccatggaaataaa
agccagggtgcgcgcacgcgcgcactggccgattttaagcgcggcgcggtgcgtactctg
gtcgccacggatattgccgcgcgcgggcttgatatcgagcgcttaccgcatgtggtgaat
tttgagttgccccatgtgcccgaggattatgtgcaccgcattgggcgcaccgggcgcgcc
ggggaaagcggtactgccgtgtccctggtcagcccagaggaaggttcgctgctcgccggc
attgagcgtctgcttggccgccgtatcgaaagtcaggccatcgccggctattcggatcgc
aaggccagttctgccagcgaggatgatttttcagatggccgatcacgcagccatgcgcca
cgccagccgcgacctggtgctgcacaggcgggacacccgcgggcgcatcgtcaggcatcg
ggttcggctcccgccggtgctggtgcgcacgggcgcaagcactcgcgagcgagatcctcg
gcggcaccacgtgccgtgcgctag
DBGET
integrated database retrieval system
