Thiorhodovibrio winogradskyi: Thiowin_02792
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Entry
Thiowin_02792 CDS
T09736
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03030
DNA replication
twg03430
Mismatch repair
twg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thiowin_02792 (dnaE)
03430 Mismatch repair
Thiowin_02792 (dnaE)
03440 Homologous recombination
Thiowin_02792 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twg03032
]
Thiowin_02792 (dnaE)
03400 DNA repair and recombination proteins [BR:
twg03400
]
Thiowin_02792 (dnaE)
Enzymes [BR:
twg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thiowin_02792 (dnaE)
DNA replication proteins [BR:
twg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thiowin_02792 (dnaE)
DNA repair and recombination proteins [BR:
twg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thiowin_02792 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
DUF655
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
WPL17753
UniProt:
A0ABZ0S9M8
LinkDB
All DBs
Position
complement(3014915..3018589)
Genome browser
AA seq
1224 aa
AA seq
DB search
MENSFVHLHLHSEFSLVDGLIRPKALVAAAVEAGMPAVAVTDLTNLFCLVRFYKAAMAAG
VKPIVGSEFRVDDPADLAHPHRLVLLVQNLTGYRNLTRLISRAYLERQDTGFPRIDRAWL
VESAEGLIALSAGQYGDVGRALVRGHREQAEQRLADWLQLFGDRFYLEVMRTGRADEDLH
IQACVDLAAAQSVPVVATNDVRFLKTEDFDAHEVRVCIHEGLTLEDPRRPRDYSPEQYLR
TPAEMAELFADLPEALENALEIAKRCNLELELGKSYLPDAPLPPGAPDGQSVDDFIAEAS
RKGLDWRLVRTFDVQAPDFAEHRRVYDERLDIELKVICDMGFPGYFLIVADFIQWAKDQG
IPVGPGRGSGAGSLVAYALKITDLDPIEHDLLFERFLNPERVSMPDFDIDFCMERRDEVI
DYVARKYGREAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDKIAKMVPFELKMTLDKAL
VESEELKAAYAEDEAVTAIIDMARKLEGLARNAGKHAGGVVIAPTKLTDFAPLYCEPGGE
NLVTQFDKDDVEQAGLVKFDFLGLRTLTIIDWALKTVNARRAEQGETPLEIEQIDAHDQR
AFALLKSCATTAVFQLESRGMKELIKKLQPDCFEDITALVALFRPGPLQSGMVDDFIDRK
HGRAAVAYPHSDLEPILKPTYGVILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKAEEM
DKQRAIFEQGATERGVDARVATHIFDLMEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
AFMAAVLSADMDNTDKVVTLIDECRAMKLAVDPPCINGSEWRFTIAGDARVIYGLGAIKG
VGESAIESILKVRDGRPFADLWDFCRRIDLKRVNRRVVEALIRAGALDKLGKNRATLFNQ
LPVALKLAEQAHASASSGQTDLFGMGGGMGDDGTDTGPDPQIAADEWPEWDEDERLLGEK
ETLGLYLTGHPIDAYESELNAMVSRRIVGLLEGGQSFGFGEEGGGRGEPRTVVGLVVAVR
ANKTQRGRMASVTLDDRTGRIEATVFSELYEQTRELLVTDSILVVSGQVVFDQFRDSWSL
RASSVRPLAEARAELADHLRLTIDLAEPERHHQGQNLINALIDILQQFRGTGLAVRVHYR
RPGATGELRLGEDWRVSPSDTLIKRLRQLLGAGGVEIVYERELRLAPSLNLIDPGRIEDE
PESEQPEPEPKPEQEPKRELAEFL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaactcctttgttcatctgcatctccattcggaattttccctggtcgatggtctg
attcgacccaaggcgctggtggcggccgcggtggaggcgggcatgccggcggtggcggtg
acggatctgaccaatctgttctgcctggtgcgcttctacaaggcggccatggcggctggc
gtcaagcccattgtcggcagtgagtttcgcgtcgatgatccggccgacctcgcgcatccg
catcggctggtgctcttggtgcagaatctgaccggctaccgcaacctgacccggctgatt
tcccgcgcctatctcgagcgccaggatactggcttcccgcgtatcgaccgtgcctggctg
gtggagagcgccgaggggctgatcgcgctctccgccgggcagtatggcgatgtcggccgg
gcgctggtgcgcggccatcgcgagcaggccgagcagcggctagcggactggcttcagctc
tttggtgacaggttttatcttgaggtgatgcgcaccggtcgggcggatgaggatctccat
atccaagcctgtgtcgatcttgccgccgcgcagtcggtgcccgtggtggcgaccaacgat
gtgcgctttctcaagaccgaggacttcgatgcccacgaggtccgggtctgtattcatgag
ggcctgacccttgaggatccgcgccgtccgcgcgattacagcccggagcagtacctgcgc
accccggcggagatggccgagctgttcgccgatctgcccgaggcgctggagaatgcgctc
gagatcgccaagcgctgcaatctggagctggagttgggcaagagctatctgccggacgct
cccctcccgccaggggcgcccgatgggcagagcgtggatgacttcattgccgaggcctcg
cgaaaggggctcgattggcgcctggtgcgtaccttcgatgtgcaggcgccggacttcgcc
gagcaccgccgggtctatgacgaacgcctggacattgagctgaaagtcatttgcgacatg
ggctttccgggttattttctcatcgtcgccgacttcatccagtgggccaaggatcagggt
attccggtcggccccgggcgcggctcgggcgccggttcgctggtggcctatgcgctcaag
atcaccgatctcgaccccattgagcacgacctgctgttcgagcgctttctgaaccccgag
cgggtgtccatgcccgacttcgatatcgacttctgcatggagcgccgcgacgaggtcatc
gactatgtggcgcgcaagtacggtcgcgaggcggtgtcgcagatcatcaccttcggcacc
atggcggccaaggcggtggtgcgtgatgtcggccgagttctaggccatccctacggcttt
gtcgataaaatcgctaaaatggtgcctttcgagctgaaaatgacgctcgacaaggcgctg
gtggaaagcgaggagctcaaggcggcctatgccgaggacgaggccgtcaccgctatcatc
gacatggcgcgcaagctcgagggcctggcacgcaatgccggcaagcacgcgggcggcgtg
gtaatcgcgccgaccaagctgacggatttcgcgccgctctactgcgagccgggcggggag
aatctggtcacccagttcgacaaggacgatgtcgagcaggccgggctggtgaagttcgat
ttcctcggcctgcgcaccctgaccatcatcgactgggcgctgaagacagtgaacgcccgg
cgcgcggagcagggcgagacgccgctcgagatcgagcagatcgatgcccatgatcaacgg
gccttcgcgctgttgaaaagctgcgccaccacggcggtgttccagcttgaatcgcgcggc
atgaaggagctgatcaaaaagctccagcctgactgtttcgaggacatcaccgccctggtg
gccctgttccgccccggccccttgcaatcgggcatggtggatgactttatcgaccgcaag
cacggccgtgccgccgtggcctatccgcactcggacctcgaacctatcctcaagcccacc
tatggcgtcatcctgtatcaggaacaggtgatgcagatcgcccaggtgctcgccggctat
tcgctcggcggcgccgacctgctgcgccgcgccatgggcaagaagaaggccgaggagatg
gacaagcagcgtgccatcttcgagcagggcgcgaccgagcgcggcgtggatgccagggtg
gccacgcacattttcgatttgatggaaaagttcgccggctatggcttcaataaaagtcac
tcggccgcctacgcgctggtcagctaccaaaccctgtggctcaagacccattacccggcc
gccttcatggccgcggtcctgtccgcggacatggacaacaccgacaaggtggtcaccctg
atcgatgaatgccgggcgatgaagctggccgtggacccaccctgcatcaatggctccgaa
tggcgtttcaccatcgccggagacgcgcgcgtcatctacggcctgggcgccatcaagggt
gtgggcgaatcggccattgagtcgatcctcaaggtgcgcgatggccggccttttgccgat
ctctgggatttctgccgccgcatcgacctcaagcgcgtcaatcgccgggtggtcgaggcc
ctgattcgcgccggtgccctggataaactcggcaaaaaccgcgcgaccctgtttaaccag
ctgccggtggcgctcaagctggccgaacaggcacatgccagcgccagcagcggccagacc
gatctgttcgggatgggcggtggcatgggggacgacgggactgacaccggccccgaccca
cagatcgccgccgacgaatggcccgagtgggacgaggacgagcgcctactcggcgagaag
gaaaccttggggctctatctcactggccaccccattgatgcctatgagtccgagctcaac
gccatggtctcgcgccgcatcgtcggtctgctcgagggcgggcagagttttggctttggc
gaggagggcggtggtcgcggcgagccgcgcaccgtcgtcgggctggtggtggcggtgcgc
gccaacaaaacccaacgcgggcgcatggccagcgtcaccctggacgatcgcaccggacgc
atcgaggcaaccgtcttctccgagctgtacgagcagacccgcgagttgctggtcaccgac
agcatcctggtggtctccgggcaagtggtgttcgatcagttccgcgacagctggtccctg
cgtgccagcagtgtgcgccctctggccgaggcgcgcgccgaactggccgaccatctgcgc
ctgaccatcgatctggccgagcccgagcggcatcaccagggccagaacctgatcaatgcc
ctgatcgacatcctgcagcaatttcgtggcaccggtcttgccgtgcgcgtccactaccga
cgtcccggcgcgaccggcgagctgcgcctgggtgaggattggcgggtgagcccaagtgac
actctgatcaaacgcctacgccagttacttggggctggaggggtggaaatcgtctacgag
cgcgagctgcgcctggcaccctcgctcaatctaatcgacccgggacgaatcgaggacgaa
cccgagtccgagcagcccgagccggagcccaagccggaacaggaacccaaacgggagctg
gctgagttcctctag
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