Thiorhodovibrio winogradskyi: Thiowin_02895
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Entry
Thiowin_02895 CDS
T09736
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg00300
Lysine biosynthesis
twg00470
D-Amino acid metabolism
twg01100
Metabolic pathways
twg01110
Biosynthesis of secondary metabolites
twg01120
Microbial metabolism in diverse environments
twg01230
Biosynthesis of amino acids
Module
twg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Thiowin_02895 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Thiowin_02895 (lysA)
Enzymes [BR:
twg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Thiowin_02895 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WPL17853
UniProt:
A0ABZ0SB28
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Position
3123061..3124401
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AA seq
446 aa
AA seq
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MDDFIRKAGDLHAEAVPLQAIAERHGTPCYVYSRATLERHWRAFDAALAGRDHLICFAVK
ANSNLAVLDVLARLGSGFDIVSVGELERVLAAGGDPRRVVFSGVGKRRDEIQRALEVGIH
CFNVESPAELARIDAIARAQGRVAPVSLRVNPDVDAGTHPYTATGLAENKFGIAIGEALA
VYQQAAALSGVRVVGIDCHIGSQLTELAPFVAALERVLALADELEHLDIGIEHLDLGGGL
GVRYIDEQPPSPAAYVSALLERLGERPYRILLEPGRAIAANAGVLLTRVEHLKRNGERKF
AIVDAAMNDLIRPALYQARQEIVPVRAHDGDSPGLSPSQSPDANANENRDENPDEHRGQL
QRVDLVGPVCETGDFLGKARELALAEGDLLAVRSSGAYGFVMSSNYNSRPRAPEVMVDGD
QMHLVRERERLADLFAGESCLPPAPD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttatccgcaaagccggcgacctccatgccgaggccgtgccgctgcaagcc
attgccgagcgccatggcactccctgctatgtctattcccgcgccacgctggagcgccac
tggcgcgccttcgatgccgccttggccgggcgcgatcatctgatctgcttcgcggtcaag
gccaattccaatctcgccgtgcttgatgtgctggcgcgcctgggctcgggcttcgacatc
gtctcggtcggcgaactggagcgggttctggccgcgggcggcgacccccggcgggtggtc
ttctccggcgtcggcaagcgccgggacgagatccaacgcgcgcttgaggtgggcatccac
tgcttcaacgtggagtccccggccgagcttgctcgcatcgatgccatagctcgcgcccag
ggacgggtcgcgcccgtgtcgctgcgcgtcaacccggatgtcgacgccggcactcatccc
tacactgccaccggtctggccgagaacaagttcggcatcgccatcggggaggccctcgcc
gtttaccagcaagcggccgcattgtccggggtgcgggtggtcggcatcgactgccacatc
ggctcccaactcaccgaactcgcgccctttgtcgccgcgctcgagcgggtgctggcattg
gccgacgaactcgagcaccttgacatcgggattgaacacctggatctcggcggcggcctg
ggcgtgcgttatattgatgagcaaccgccctcgcccgccgcttatgtcagcgccctgctt
gagcgcctcggcgagcgcccctaccggatattgctcgagcccggacgcgccatcgccgcc
aacgccggtgttctgctcacccgggttgagcatctgaaacgcaatggcgagcgcaaattc
gctattgtggatgcggccatgaacgacctgatccgccccgctttgtatcaggcgcgccaa
gagatcgtcccggttcgcgcgcatgacggcgacagcccaggcctgagcccaagccagagc
ccagatgcgaacgccaatgaaaaccgcgatgagaaccccgatgagcatcggggccagctc
caacgcgtcgatctggtcgggccagtatgtgaaaccggggatttccttggcaaggcacgc
gagcttgcgctggcagagggcgatctgctcgcggtgcgctcaagcggcgcctatggcttt
gtgatgagctcaaactacaacagccgcccgcgcgcgcccgaggtgatggtcgatggcgac
cagatgcatctggtgcgcgagcgcgagcgccttgctgatctctttgctggcgaatcctgc
ctgccacccgcgccagactga
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