KEGG   Thiorhodovibrio winogradskyi: Thiowin_03526
Entry
Thiowin_03526     CDS       T09736                                 
Symbol
vapC_5
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
twg  Thiorhodovibrio winogradskyi
Brite
KEGG Orthology (KO) [BR:twg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:twg03016]
    Thiowin_03526 (vapC_5)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:twg02048]
    Thiowin_03526 (vapC_5)
Transfer RNA biogenesis [BR:twg03016]
 Prokaryotic type
  tRNA degradation factors
   Thiowin_03526 (vapC_5)
Prokaryotic defense system [BR:twg02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    Thiowin_03526 (vapC_5)
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: WPL18453
UniProt: A0ABZ0SCV5
LinkDB
Position
3776159..3776563
AA seq 134 aa
MRYLLDTNIMIAAMKEVASVKRQLEQRLLADILLSPVVLGELEFGVEKSAYREQNAARLA
ALVKTLALAPIDARVSRRYGEIRAHLERCGTPIGANDLWIAAQGSALDVIVVTDNQGEFN
RVPGLRTENWLSRS
NT seq 405 nt   +upstreamnt  +downstreamnt
gtgcgctacctacttgataccaacatcatgatcgcagcgatgaaggaggtcgcctcggtc
aaacgccaactggagcaaagactgttggccgatatcctgctctcacccgtggtcttgggc
gagcttgagttcggcgtcgagaagagcgcttaccgcgaacagaacgcggcacgtcttgct
gcgttggtaaagaccttggcgttggcgcccattgatgcgcgcgtcagccggcgctatggt
gagatccgcgcgcatctcgagcgctgtggaacaccgattggcgcgaatgatctttggatt
gccgcgcaaggctcggcgctcgatgtgattgtcgtgacggacaatcagggcgagttcaac
cgcgtccccgggttgcgcacggaaaactggttaagtcgctcgtag

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