Thiorhodovibrio winogradskyi: Thiowin_03892
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Entry
Thiowin_03892 CDS
T09736
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03030
DNA replication
twg03410
Base excision repair
twg03420
Nucleotide excision repair
twg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thiowin_03892 (polA)
03410 Base excision repair
Thiowin_03892 (polA)
03420 Nucleotide excision repair
Thiowin_03892 (polA)
03440 Homologous recombination
Thiowin_03892 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twg03032
]
Thiowin_03892 (polA)
03400 DNA repair and recombination proteins [BR:
twg03400
]
Thiowin_03892 (polA)
Enzymes [BR:
twg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thiowin_03892 (polA)
DNA replication proteins [BR:
twg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Thiowin_03892 (polA)
DNA repair and recombination proteins [BR:
twg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Thiowin_03892 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thiowin_03892 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WPL18801
UniProt:
A0ABZ0SCQ7
LinkDB
All DBs
Position
4178368..4181103
Genome browser
AA seq
911 aa
AA seq
DB search
MSKLYDLVLLDASGYLFRAYHALPKLSNSRGEPTGALVGVLNMIRNLSERYQPRYLGVVF
DAPGPTFRNALFADYKANRPEMPDDLRQQIEPLREIVRALGLPLLIVPEVEADDVIGTLA
TRAEAAGLRTLISTGDKDLAQLVTDRIHLVNTMNDNLLDPEGVREKFGVPPERIVDYLSL
VGDSVDNIPGVPKCGPKTAVKWLGEHGDLDNLMAHADHIGGKVGENLRANLAQLPLARQL
TTIKRDVALELAPEDLTPAEPDTDSLRTWYQRIESRRLLATLEAVADSETASALEQQTSP
KADQANKAESDYQVILTEEAFQRWLARLQEAELFAIDSETTALEYMQAEIVGLSFAIEPG
EAAYLPLAHRYPGAPEQLDRDQVLAALKPLLEDPTRLKLGQNLKYDMNVLAGHGIRFQGI
AHDSMLQSYVLDSTASRHDMDTLALKYLGHKCTAFEDIAGKGAKQLCFDQIALEQAAPYA
AEDADITLQLHRRFWPRLEQNERLQALYQDIEIPLIPVLSRMERLGVRIDADELNQQSRE
LAERVAALEQQAYEVAGRPFNLGSPKQIGAIFFDELGLPVVSRTPKGAPSTSESVLEKLA
EDGHELPRLILEHRGLSKLRSTYTDKLPRMRDARTGRVHTSYHQAVAATGRLSSSDPNLQ
NIPIRREEGRLIRRAFIPEPGYRLLAADYSQIELRIMAHLSGDERLLAAFAEGQDIHRAT
AAEIHGLAPDEVTADQRRSAKAINFGLIYGMSAFGLARQLGIERREAQAYVNTYFARYPG
VKAFMERIREQAARDHYVETLFGRRLYLPDINHQNQQRRQGAERTAINAPMQGSAADIIK
RAMIAVDAWIERERPPVRMIMQVHDELVFEITEDAVESASDRIRTLMQSAAELKVPLIVD
VGVGENWDEAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctctacgatctcgtgctgctcgacgcctcaggttacctgtttcgcgcctat
catgccctacccaagctcagcaactcgcgcggggagccgaccggcgccctggttggcgtg
ctgaacatgatccgcaacttaagtgagcgctatcaaccccgctatctcggcgtggtgttc
gacgcgcccggcccaacattccgcaacgcgctctttgccgattacaaggccaatcgcccg
gagatgcccgatgacctgcgccaacagatcgagccgttgcgcgagatcgtgcgcgcgttg
gggttgcccttgctgatcgtgcccgaggtggaggccgatgatgtgatcggcaccttggcg
acccgcgccgaggcggccgggctgcgcacgctcatttccaccggcgacaaggatctggcg
cagctggtgacggatcgcattcatttggtcaacaccatgaacgacaacctgctcgacccc
gagggcgtgcgcgagaagttcggcgtgccgcccgagcgcattgtcgattatctcagcctg
gtgggcgatagcgtcgataacattcccggcgtgcccaagtgcggccccaagacggcggtc
aagtggctgggcgagcatggcgatctcgataacctgatggcgcacgcggatcacattggc
ggcaaggtgggcgaaaacctgcgcgcgaatctggcgcaactgccgctggcgcgacagctg
accaccatcaaacgcgatgtggcgttggagctggcgccggaggatctgacacccgccgaa
ccagacaccgacagcctgcgtacctggtaccagcgcatcgaatcacgccggctgctggca
accctggaggcggtggcggatagcgagaccgccagtgcactggagcagcaaaccagcccc
aaggccgatcaggccaacaaggcggagtcggactatcaggtcatactgaccgaggaggcc
ttccaacgctggctcgcgcgcctgcaagaagccgagctgttcgccatcgacagcgaaacc
acggcgcttgagtacatgcaagccgagatcgtcggcctgtcttttgccatagagccgggc
gaggcggcctatctgccgctcgcgcatcgctatcccggcgcccccgagcaactcgaccgc
gaccaggtgctggccgcgctcaagccactgcttgaggacccgacgcgcctgaagctcggg
cagaatctcaagtacgacatgaacgtgctcgccggccatggcatcaggttccaaggcatt
gcccacgacagcatgctgcaaagctatgtgctcgacagcaccgccagccgccatgacatg
gacacgctggcgctgaaatatctgggccacaagtgcaccgccttcgaggacatcgccggc
aagggcgccaagcaactgtgcttcgatcagatcgcgctggagcaggccgcgccctacgcc
gccgaggatgccgacattacgctccagttgcatcgccgcttttggccgcgactggagcag
aacgagcgcctgcaggcgttgtatcaggacatcgaaatcccgctgatcccagtgctgtcg
cgcatggagcgcctgggtgtgcggattgatgccgatgaattgaaccaacaaagccgtgag
ttggccgagcgcgtcgcggcgttggaacaacaagcctatgaggttgccggtcgccctttc
aatctcggctcgcccaagcaaatcggcgcgattttcttcgacgaactcggcctgccggtg
gtctcgcgcacccccaagggcgcgccttcaacctccgagtccgtgctggaaaaactcgcc
gaggacggccacgaactgccgcgcctgattctggagcatcgcggcctgtcgaaactgcgc
tccacctacaccgacaagctgccgcgcatgcgcgatgcccgcaccggccgggtgcatacc
agctatcatcaggccgtcgccgccaccgggcgcctgtcctccagcgaccccaatctgcaa
aacatccccatccgccgcgaggaaggccgacttatccgccgcgccttcatccccgagccc
ggctaccgactgctggcggcggactactcccaaatcgagctgcgcatcatggcgcacctc
tcaggcgacgaacgcctgctcgccgccttcgccgaggggcaggacatccaccgcgccacc
gcggcggaaatccacggactcgcgcccgatgaggtcacggcggaccagcgccgctcggcc
aaggcgatcaacttcggcctcatctacggcatgtccgcctttggcctggcgcgccaactg
ggcatcgaacggcgggaagcccaggcctatgtgaacacctactttgcccgctacccgggc
gtgaaagccttcatggagcgcattcgcgaacaggccgcgcgcgaccactatgtcgagact
ctgttcggccgccggctctatctacccgacatcaatcaccaaaaccagcaacgccgccag
ggcgccgagcgcaccgccatcaacgcccccatgcagggtagcgcggcggacatcatcaag
cgcgccatgatcgccgtcgatgcctggatcgagcgcgagcgcccaccagtgcgcatgatc
atgcaggtacacgacgaactggtattcgagatcaccgaggacgccgtggaatccgccagt
gaccggattcgcaccctgatgcaatccgccgccgagctaaaagtgcccctgattgtcgat
gtcggtgttggggagaattgggatgaggcgcattag
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