Thiorhodovibrio winogradskyi: Thiowin_03980
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Entry
Thiowin_03980 CDS
T09736
Symbol
rapA_8
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
twg
Thiorhodovibrio winogradskyi
Motif
Pfam:
Helicase_C
NOV_C
SNF2-rel_dom
ResIII
DEAD
ERCC3_RAD25_C
AAA_22
Helicase_C_4
SLFN-g3_helicase
DUF5768
Motif
Other DBs
NCBI-ProteinID:
WPL18889
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Position
4276535..4279774
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AA seq
1079 aa
AA seq
DB search
MLPRQPLRFVLADDPGAGKTIMAGLYIRELLLRADAERILIVAPGSLVEQWREELLEKFD
LRFQVVSPGLIQAAPSGNPFADFPRLIARLDQLARNETLQDQACAAGWDLIVFDEAHKLA
AHFFGTKLEKTGRFRLAEALGAETRHLLLMTATPHNGKEEDFQLFLSLLDSDRFYGKFRD
GVHQVDASDLMRRLVKEELVKFDGTPLFPERSAYTVNYELSPPEVALYEAVTAYVQTEMG
KADEIGGKRRNSVGFALTALQRRLASSPEAIYQSLKRRRERLESRLREEKLGLRAQTLHA
ETLDGLDLPEDDDDLNAEEQETLEETLVDQATAARTVAELESEIVFLRGLEHQAKTVVAS
GQDRKWDELSRLLQHRPEMQNDAGRQRKLIIFSEHRDTLNYLHARIAGVLGREDAIVVIH
GCTHGDERKKRQAQFRSDPKVRILIATDAAGEGVNLQNANLMVNYDLPWNPNRLEQRFGR
IHRIGQTEVCHLWNLVAAETREGDVYARLLTKLEIEGQALNGRVFDILGEVFENIRLRDL
LLEAIRYGDQPEVRARLTQRIETALDHQRLQDLLARNALTQETLGPEQLFKVKRQMEEAE
ARRLQPYFVRAFFLRAFEALHGSAHRREQGRFEITHVPASLRERDRRLSGRNRRETEPVL
ARYERICFERDATRLADRPGDPGAVLMHPGHPLMLAMTDVLLERHGNLLRQGAILVDPAD
DGLTPHLLLLLTHKVQAGDGTILSTRLQFVRVAPDGQTQFAGWAPHLDLEPLGLGDRKQE
LGDSEEAGCPIDDEGTSEADDLIANCLPLFPANIEDRAVALATATLAPVHYQEIAERRIA
HIEKTLVAVHERLTKEISFWTDRWERLREDKEAGKDVRLNLDNAQRTILDLQGRLDRRKR
ELEVMRHVINSPPAVIGAALVIPAGLLRQRRGRAPAEPDVLSADAQARAHIEQLAMTAVR
HAEEARGWTVEDVSAAKCGWDLTAYPPANLQPQPLPRHIEVKGRAAGATTVTITRNEMLY
AFNQGAKFVLAIVLVHPDDRTEGPYYLRNPFDREPAWGVASVNYALRELLGRASPQASG
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcgtcagccgctgcgcttcgtcctggccgatgaccccggcgctggcaagacc
atcatggccgggctctacatccgcgagctgctgctgcgcgccgatgccgagcgcatcctg
atcgtcgcccccggcagcctggtcgagcaatggcgcgaggaactgctggagaaattcgac
ctgcgttttcaggtcgtctcgccaggcttgatccaagccgcgcccagtggcaatcccttc
gccgactttccccgcctcatcgcccggctcgatcagctcgcgcgcaacgagaccctccaa
gaccaagcctgcgccgctggctgggacttgatcgtgtttgatgaagcgcacaagctcgcc
gcgcactttttcggcaccaagcttgagaagaccgggcgttttcgcctcgccgaagccctg
ggggccgagacgcggcatctgctgctgatgaccgccaccccgcacaatggcaaggaggaa
gattttcagctctttctctcgctgctcgactccgaccgtttctatggcaagttccgcgat
ggggtgcaccaggtcgacgcctcggacctgatgcgccgcctggtcaaagaagaactggtc
aagttcgacggcaccccgctgttcccggagcggagcgcctacacggtcaactatgaactc
tccccgccggaagtggcgctctatgaggccgtcaccgcctatgtgcagaccgaaatgggc
aaagccgatgagatcggcggcaagcgccgcaattcggtcggcttcgcgctcactgcccta
cagcggcgactcgcctccagccccgaggccatctatcaatccctcaaacgccggcgcgaa
cggctcgaaagtcgcctgcgcgaggaaaagctcggcttgcgcgcccagaccctgcacgcc
gaaaccctcgacggcctggacctgcccgaggacgacgacgatctgaacgccgaggagcag
gaaaccctggaggaaacgttggtcgatcaggccaccgccgcgcgcaccgtcgccgagctg
gaaagcgaaatcgttttcctgcgtggcctggagcaccaggccaagaccgtggtcgcctcc
gggcaggatcgcaagtgggacgagctgtcacggctgttgcagcaccgcccggagatgcag
aatgacgccggtcgccagcgcaagctgatcatcttctccgagcaccgagacaccctgaac
tacctgcacgcacgcattgccggcgtgctcgggcgcgaagatgctattgtcgtcatccac
ggctgcacccatggcgacgagcgcaagaaacgccaggcacaatttcgctccgacccgaag
gtgcgcatcctcatcgccaccgatgccgctggcgaaggcgtgaacctgcaaaacgccaac
ctcatggtcaactatgacctgccgtggaaccccaaccggctggagcaacgcttcgggcgc
atccaccgtatcggtcagaccgaagtctgtcacctatggaacctggtcgccgccgagacc
cgcgagggcgatgtctacgcccgcctgctgaccaagctggaaatcgaaggccaggcgctc
aacgggcgagtgttcgacatcttgggcgaagtcttcgagaacatccgcctgcgcgatctg
ctgctggaggccatccgctacggcgaccagcccgaggtgcgcgcgcggctcacccagcgc
attgagaccgcgctcgatcaccagcgcctgcaagacctgctcgcgcgcaatgcgctgacg
caagaaaccctcggccccgagcaactgttcaaggtcaagcgccagatggaagaagccgaa
gcccggcgcttgcagccctatttcgtgcgcgctttcttcctgcgcgccttcgaggccctg
cacggcagcgcccaccgccgcgagcagggccgcttcgagatcacccacgtccccgccagc
ctgcgcgagcgcgaccggcgcctgagcggccgcaatcgccgcgagaccgaacccgtgctc
gcgcgctacgagcgcatctgcttcgagcgcgacgccacccgcctcgcggaccggcccggc
gacccgggcgcggtgctgatgcaccccggtcatccgctgatgctggccatgaccgacgtg
ctgctggagcgccacggtaatctgctgcgccagggtgccatcctggtcgatccggccgat
gatggcctcacgccccatctgctgctgttgctcacccacaaagtccaggccggcgatggc
accatcctctccacccgcctgcaattcgtgcgggtagcgccggacggccagacccagttc
gccggctgggcgccgcatctggacctcgaacccttgggattaggagataggaaacaggag
ttaggagatagcgaagaggcgggttgtccaattgacgatgaaggaaccagcgaggccgat
gacctaattgctaactgcttacccctatttcctgccaacatcgaggaccgcgccgtcgcg
ctcgccaccgccaccctggcaccggtccattatcaggagatcgcggagcggcgtatcgcc
catatcgaaaagaccctggtcgcggtgcatgagcgcctgaccaaggaaatcagcttctgg
accgaccgttgggagcgcctgcgcgaagacaaagaggccggcaaggacgtgcgcctcaac
ctcgacaacgcccagcgcaccatactcgacctgcaaggccggctcgaccgacgcaagcgc
gaactcgaagtcatgcgccacgtcatcaacagcccaccggcggtgattggcgcggcgctg
gtgatccccgccggcctgctgcgccaacgccgtggcagagcccccgccgagccggatgtc
ctcagcgctgacgcccaggcccgcgcccatatcgaacaactggcgatgaccgccgtgcgc
cacgccgaggaggcacgcggctggaccgtcgaagacgtctccgccgccaaatgcggctgg
gatctcaccgcctacccgccagcgaatcttcagccccaacccctgccacgccacattgaa
gtcaaaggccgcgccgccggtgccaccacggtgaccatcacccgcaacgagatgctctac
gccttcaaccagggcgcgaagttcgtcctcgccatcgtgctggtgcaccccgatgatcgc
accgaggggccttactacctgcgcaatccctttgatcgggagccggcttggggggtggcg
tcggtcaattacgcgttaagggaactgctcggacgggcatccccccaagcctctggataa
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