Thiorhodovibrio winogradskyi: Thiowin_04672
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Entry
Thiowin_04672 CDS
T09736
Name
(GenBank) PKD repeat
Organism
twg
Thiorhodovibrio winogradskyi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
FG-GAP_3
DUF4214
Cadherin_CELSR2_9th
Cadherin_4
Big_9
FG-GAP
Beta-prop_BBS7
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
WPL19539
UniProt:
A0ABZ0SGC1
LinkDB
All DBs
Position
4948942..4958670
Genome browser
AA seq
3242 aa
AA seq
DB search
MSTPAFQTPQTNPFGLTDVGNYSAPTLADLDADGDLDALVGAFDGTLNYFENTGSASSAA
FASAENASAFGLTDVGFKSAPTLADLDGDGDLDALVGASDGKLYYFKNTGSASSAAFASA
QDASAFGLTDVGDFSAPTFADLDGDGDLDALVGENDGTLNYFKNTGSASSAAFTSAQDAS
AFGLTNVGSFSAPTFADLDGDGDLDALVGEQDGTLNYFQNTGSASSAAFASAQDASAFGL
TGVGSNSAPTFADLDGDGDLDALVGEYDGNLLFFENGIPPGVTISPSGDSTQVTEGGASD
TYTLVLDSQPTADVTITLDTTHGGTGNGQLSTDATTLTFTTTNWDTPQTVTVSAVDDGIG
EGPHFGVIAHSVSSTDGNYNGLSVDNLSVQIADNDLPSGGPTFLTPTTNHFGLTDVGSNS
APTLADLDGDGDLDALVGAFDGTLNYFENTGSASNAAFASAQDASAFGLTDVGSNSAPTL
ADLDGDGDLDALVGASDGTLNYFENTGSASAAAFASAQDASAFGLTDVGFKSAPTLADLD
GDGDLDALVGEYDGTLNYFENTGSASSAAFASAQNAGAFGLTDVGSYSAPTFADLDGDGD
LDALVGEYDGSLNYFENTGSASSAAFASAQDASAFGLTDVGTFSAPTFADLDGDGDLDAL
VGERYGTLIYFENQENTAPSFTGLDGTPTFTEGGSAAVLDANVQVSDAELDALNSGDGDY
HGASLTIARNGGADASDDFGFSDGNDISLSAGNLIKNGETIASFGVSAGTLTITFTNANG
ETPTSADVDTILQQITYSNSTDDPPASVTLDWTFNDGTADSSGSNQTTVTVTPVNDAPTL
TANGSTPTFTEDGDAVTLFSDASASTLESGQTFTGLTLTVTNVTEGANEILSIGGTDVPL
IATGGSPIAITGGGSAAVTLDGSTATVTVTDMTRDAAALQSLVEGISYRNISDDPTIADR
MVTITSLTDSGGTANGGVETAHLTIASTLSLTAVNDAPVLVLSETTQGFETSDSLTSNFN
DGNATPVMSWSETAGLSGGGGVSIPGGTSEVWTANQGLTLVIGETYTLSTFAYISGNSGY
GGLGFAVNDSNLPGSTTAGTNGFNLGIGFHGGGGSYINDDSETNLSWTGTSGGDALVTGN
WYRLSYAITPTGSNNFEVSFEIWNSDASGVVGTRAADPVSTTLTNTHLTEGLTVYPYFSN
NGSRLGVIDDFTVTSFSSGYALTATDEDTTSTSTAVSTILSGLGYSDSDSAQSGAAISET
TGNGTWQYSTDGGSTWTAVGAVSASAALLLDADQLLRYVPDGVSDETATLTLRGWDQSSG
APGTTADTSSNGGSTAFSATTGTVSISVTEVNDAPTLSANGSDPTFTEDGSAVILFSAAS
ASTVESGQTFQGLTLTVTHVSDSAESLAIDGSTVELKNDASGTTTNNSLSYSVSVAAGTA
TVTLSGGTLAAADLQTLIDGISYSNSSQNPSTDNNREVTISSIQDSGGTANGGVDTASPN
IGSTVTLEAVNDAPVIANLDADNPSFVVGASSPVKLDVGANATLTDVDHSSFGHSGFLLV
TQSSSGSIATGDLSFDGTTVKAGDDGVVTSGERVTVNGTDIGVVTTSAAADNTIHDLLKI
TFDTGAATPALISTLLQNLSYTETPSNTAIGDRRFDISVNDGEESSSVATVTLTGAAAPT
LTSATYDWASGQLLVTGTDFIAQPGDDNDIDVSKLSLVGEGGDSVTLTSSPVEISSATQF
SVTLNAADQDAVNQIFNKNGASSTGGTTYNLTAAEDWAAGVEASITLADLTGNGITVSNV
AAPTIASATYNGRTGVLEVTGSGFLKRDGADNDIDASRFTITGEAGNTHTLTDTADVEIT
SATRFSLTLSETDKTAVNALINQNGTASSDNTTYNLAATENWALGADTAVDVADRTGNGI
TATVNQPPLITSDLGGDTAAVDAVENSTAVTTVTATDGDDDTVTFSITGGADQDLFQIDA
NSGVLSFKTAPDFENPSDSDNSYEVVVQASDGYGGSDTQSITATVTDVNEAPTITSGDTG
SVAENAPTTTVIYRAEATDPDAGQTLTYSLSGTDADLLEIDATSGEVTLKNPADFETKPS
YSFNVIATDDGSGTLSDSQAVTVSVTDVNEAPTINSGDTGSVEENAATSTVIYTATATDV
DGNTLSYSLSGTDAALLDIDASTGEVTLKNPADFEAKPSYSFNVIATDDGSGTLSDSQAV
TVSVTDVNEAPSITSGDTGSVAENAATSTVIYTATATDVDGDTLSYSLSGTDAALLDIDA
TSGEVTLKSPADFETKPSYSFNVIATDDGSGTLSDSQAVTVSVTDVNEAPTITSGDTGSV
AENAATSTVIYTATATDVDGDTLSYSLSGTDAALLDIDASTGEVTLKNPADFETKPSYSF
NVLATDDGSGALSDTQAVTVSVTDVNEAPSITSGDTGSVEENAATSTVIYTATATDVDGD
TLSYSLSGTDADLLEIDANSGAVTLKASADYETQASYSFNVIATDNGSGALSDTQAVTVN
VVNLNDVATGSVSIDGTATQGEVLTANTSTLADADGLGSFSYVWKADGSIIDGASASTYN
LTQAEVGKAISVEVRYTDQQGTAEGPITSTATDPVTNLNDAPEITSNGGGDTAAFSVAEN
SINVTQVIAFDIDGDPLGFAITGGADQGGFSIDANSGVLTFQSAPDFENPGDSDRDNRYE
VAVQVSDGNGGSDTQTISVTITDVAEPAPEPEPEPEPEPEPEPIIPPSEDWDALPDDDGD
GVPEVVEDFVPALIEGGATGDGNGDGILDREQADVASVPIRQTDQVSVNPDAPSIFVTLV
GGVSTDGGSGSAPMPEGGVLIRGLTQRDAPADRPTDLSMPLGLIGFDAEITNGSIAVPFS
LLVDGNLGVNGFWKQTSDGDWVNLASPEFGGQVVTEGAMTRLDFVIEDNGLFDTNPAIGS
ITDPGAPGYREPLEPPPTDCPYRPFQPDSDGDGVPDDLEARLGLDPALKDNDVFNDSALF
VQQLYRDLLWREGEDAGVAYWTGALEAGANHEQVVMAFLDAPEYQATAGLIGRFYEGALG
RAPDACGLDCWVAQAQAGVPMEQIAEAFLQSSEFVDQQGALTSTSLVETLFGAMLQRAPS
ETELSTWSQALESGTSAGALLLDLAQQPEYLALQEDSLLLNSLYLSTLDRAPDEAGLAWW
QSQLTQSDDNLGAIAGFITSREYQQRFVPAASDSPASGFDDGAALGLLGQSEPADLGGVL
LG
NT seq
9729 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccgccttccaaacgccccaaaccaaccccttcggcctgaccgacgtgggc
aactattccgccccgaccttggccgatctcgacgccgacggcgatctcgatgccctggtc
ggcgcattcgatggcaccctgaactacttcgagaacaccggcagcgccagctccgcagcc
ttcgccagcgccgagaatgccagcgccttcggcctgaccgacgtgggcttcaagtccgcc
ccgaccttggccgacctcgacggcgacggcgatctcgatgccctggtcggcgcatccgat
ggcaagctgtactacttcaagaacaccggcagcgccagctctgcggccttcgccagcgcc
caggatgccagcgccttcggcctgaccgacgtgggcgacttttccgccccgaccttcgcc
gacctcgacggcgacggcgatctcgatgccctggtcggcgaaaacgatggcaccttgaac
tacttcaagaacaccggcagcgctagctccgcggccttcaccagcgcccaggacgccagc
gccttcggcctgaccaacgtgggctccttttccgccccgaccttcgccgacctcgacggc
gacggcgatcttgatgccctggtcggcgaacaagatggcaccctcaactacttccagaac
accggcagcgccagctctgcggccttcgccagcgcccaggacgccagcgccttcggcctg
accggcgtgggctccaattccgccccgaccttcgccgacctcgacggcgatggcgatctt
gatgccctggtcggcgaatacgatggcaatctgctgttttttgagaacgggataccgccg
ggtgtgaccatcagccccagcggcgacagtacccaggtcacagaaggcggcgccagcgac
acctacaccctggtgctcgacagccagcccacggctgacgtcacaatcaccctcgacacc
acgcacggcggcaccggcaacggtcagctcagcaccgacgcgaccacgctgaccttcacc
accaccaactgggacaccccacagacggtcaccgtcagcgccgtggatgacggcatcggc
gaaggcccgcacttcggcgtcatcgcccacagcgtcagcagcacggatggcaactacaac
ggcctcagcgtcgacaacctctcggtgcagatcgccgacaacgacctgccgagcggcggt
ccgacctttctcaccccaaccaccaaccacttcggcctgaccgacgtgggctccaattcc
gccccgaccttggccgacctcgacggcgacggcgatctggatgccctggtcggcgcattc
gatggcaccctgaactacttcgagaacaccggcagcgccagcaacgccgccttcgccagc
gcccaagacgccagcgccttcggcctgaccgacgtgggctccaattccgccccgaccttg
gccgacctcgacggcgacggcgatctcgatgccctggtcggcgcatccgatggcaccctg
aactacttcgagaacaccggcagcgccagcgccgccgccttcgccagcgcccaggacgcc
agcgccttcggcctgaccgacgtgggcttcaagtccgccccgaccttggccgacctcgac
ggcgacggcgatctcgatgccctggtcggcgaatacgatggcaccctgaactacttcgag
aacaccggcagcgccagctccgcggccttcgccagcgcccagaacgccggcgccttcggc
ctgaccgacgtgggctcctattccgccccgaccttcgccgacctcgacggcgacggcgat
ctcgatgccctggtcggcgaatacgatggcagcctgaactacttcgagaacaccggcagc
gccagctccgccgccttcgccagcgcccaggacgccagcgccttcggcctgaccgacgtg
ggcaccttttccgccccgaccttcgccgacctcgacggcgacggcgatctcgatgccctg
gtcggcgaacgctatggcaccctgatttacttcgagaaccaggaaaataccgcccccagc
ttcaccggcctcgatggcacaccgaccttcaccgaaggcggcagcgcggcggtactggac
gccaatgtacaggtcagcgatgccgaactggatgccctcaacagcggcgacggcgactac
cacggcgccagcctgaccatcgcccgcaatggcggcgctgatgccagtgacgacttcggt
tttagtgatggcaacgacatcagcctgagcgctggcaacctgatcaaaaacggtgagacc
atcgccagcttcggtgtcagcgcaggcaccctgaccatcaccttcaccaacgccaacggc
gaaaccccgacctccgccgatgtcgacaccatcctgcagcagatcacctacagcaacagc
accgatgacccgcccgccagcgtcaccctcgactggaccttcaatgacggcaccgccgac
agcagtggcagcaatcaaaccacggtgaccgtcaccccggtcaacgacgcccccacgctc
accgccaacggctcaacccccaccttcaccgaagacggcgacgcggtcaccctgttcagc
gatgcctcggccagcacgttggaaagcggccagaccttcactgggctgaccttgacggtg
acgaatgtgactgagggagccaatgagatcctgtccatcggcggcaccgatgtgccactc
attgccaccggcggcagcccgattgccattactgggggtggcagtgccgccgtgaccttg
gatggcagcacggcgaccgtcacggtcaccgacatgacccgcgatgccgcagccctgcaa
agcctggtcgagggcatcagctaccgcaacatcagcgatgatcctacgattgctgatcgg
atggtcaccatcacctcgctgaccgactccggtggcaccgccaatggcggagtggaaacc
gctcatctgaccatcgcctccaccctcagcctgacggcagtcaacgacgcccccgtcctc
gtgctcagcgagaccacccagggcttcgagacctccgacagcctcaccagcaacttcaac
gacggtaacgccacgccggtgatgtcctggagcgagaccgccgggctctccggcgggggc
ggcgtgagtatccccggcggcaccagcgaggtctggacggccaaccaaggcctcaccctg
gtcatcggcgagacctacaccctatcgacctttgcctatatctctggcaacagcggctat
ggcggcctaggctttgcggtcaacgacagcaacctccctgggtccaccactgcgggcacc
aacggcttcaacctcggcatcggctttcacggcggcggtgggtcgtacatcaacgacgac
agcgagaccaacctctcctggaccggcaccagcggcggggatgccctggtcaccggcaac
tggtatcggctgagctatgccatcacccccactggcagcaacaactttgaggtcagcttc
gagatctggaacagcgatgcctctggcgtggtggggactcgggcggcggatcccgtttcc
accaccctgaccaacacccatctcaccgaggggctgacggtctatccctatttctccaat
aacggcagccgcctgggcgtgatcgacgacttcaccgttacctcgttcagcagcgggtat
gccctcaccgccaccgacgaagacaccaccagcacctcgaccgccgtaagcaccatccta
tccggcctgggctacagcgacagcgactcggcgcaatccggggcagccatctccgaaacc
acgggcaacggcacctggcaatactcgaccgacggcggcagcacctggacagcggtgggc
gcggtgagcgcctccgcggccctgctgctcgatgcagaccaacttctgcgctatgtgccc
gacggggtcagcgacgagaccgcgaccctgaccctacgtggctgggaccagagcagcggc
gcacccggtaccacggcggacaccagcagcaacggcggcagcaccgccttctcggccacc
accgggactgtcagcatttcggtcaccgaggtcaacgatgcccccacgctttcggccaac
ggttctgatcccacctttaccgaagacggcagcgccgtcatcctgttcagcgccgcctcg
gccagcacggtggaaagcggccagaccttccagggcctgacgctgacggtcacgcatgtc
tccgacagcgcggagtcacttgccatcgacggcagcacggtcgaactgaagaacgacgca
tcaggcaccaccaccaacaacagcctgagctacagcgtcagcgtggcagccggcacggcc
acggtgacactctcgggcggcacgctcgccgcggccgacctgcaaacactgatcgacggc
atcagctacagcaacagcagccagaaccccagcaccgacaacaaccgagaggtgaccatc
agctcgatccaggacagcggcggcaccgccaacggcggggtcgataccgcctcgcccaac
atcggctcgacggtgacgctggaggcagtgaatgatgcacccgtgatcgccaatctggac
gctgacaacccgagctttgtcgtcggtgccagcagcccggtcaagctggatgtgggcgct
aacgcgaccctgaccgatgtcgatcacagcagctttggtcacagcggcttcctgctggtc
acccaatccagcagtggctccatcgccaccggtgatctctccttcgacggcaccaccgtc
aaggccggcgatgatggcgtggtgacgtccggcgaacgcgtcacggtcaatggcaccgat
atcggtgtggtcaccaccagcgccgccgcggacaacacgatccatgacctgctcaagatc
accttcgacaccggcgccgccaccccggcgctgatcagcaccctgctgcaaaacctctcc
tacaccgaaacgcccagcaacaccgcgataggtgatcgccgcttcgacatcagcgtcaat
gatggtgaggagtcctcatcggtcgcgaccgtgaccctcaccggcgctgccgccccgacc
ctcaccagcgccacctacgactgggccagcggtcaactgctggtgaccgggacggatttc
atcgcccagccgggggacgacaacgacatcgatgtcagcaagctcagcctggtgggggag
ggcggcgacagcgtcaccctgaccagcagcccggttgagattagcagcgcgacccagttc
agtgtcaccctgaatgcggctgaccaagacgccgtcaaccagatctttaacaaaaacggt
gccagctccacgggtggcacaacctacaacctgaccgccgccgaagactgggcagccggg
gtcgaggccagcatcaccctggccgacctgaccggcaatggcatcacggtcagcaacgtc
gccgcgcccaccatcgccagcgccacctacaacggcagaaccggcgtgctcgaggtcacc
ggcagcggattcctcaagcgtgatggcgcggacaacgacatcgatgccagccgcttcacc
atcaccggcgaagccggcaacacccataccctcaccgataccgccgatgtcgagatcacc
agcgcgacccgcttcagcctgaccctgtcggaaaccgacaaaaccgccgtcaacgccttg
atcaaccaaaacggcaccgcgtcaagcgacaacaccacctacaacctggcggctacggaa
aactgggcattgggtgccgatacggcggtcgatgtcgctgatcggaccggcaatgggatc
accgcgactgttaaccaaccgccgctgatcaccagcgacctcggcggcgacaccgctgcc
gtggatgcggtggaaaacagcaccgcggtcaccaccgtcaccgccaccgatggcgacgat
gacaccgtcaccttcagcattaccggcggcgccgaccaggacttgttccagatcgatgcc
aacagcggtgtgctgagtttcaagaccgccccggacttcgagaacccgagcgacagcgac
aacagctatgaggtcgtggtgcaagccagtgacggctacggcggcagcgacacacagagc
atcacggcgaccgtcaccgacgtcaatgaagcgccgaccatcaccagcggcgacactggc
tcggttgcggaaaacgccccgaccacgacggtgatctacagggcagaggcgactgatccc
gacgctggccagacattgacctacagcctctccggcaccgatgccgacctgctcgagatc
gacgccacgagcggcgaggtcaccctcaagaacccggccgattttgagaccaagcccagc
tacagcttcaacgtcatcgccaccgacgatggcagcggcacgctcagcgacagccaagcg
gtcaccgtcagcgtcaccgacgtcaatgaagcgccgaccatcaacagtggcgacaccggc
tcagtcgaggaaaacgccgccaccagcacggtcatctacaccgccaccgccacggacgtg
gatggcaacaccctgagctacagcctctccggcaccgatgccgccttactcgacatcgac
gccagcaccggcgaggtcaccctcaagaacccggccgattttgaggccaagcccagctac
agcttcaacgtcatcgccaccgacgatggcagcggcacgctcagcgacagccaagcggtc
accgtcagcgtcaccgacgtcaatgaagcgcccagcatcaccagcggcgatactggttcg
gtcgccgagaacgccgccaccagcacggtgatctacaccgccaccgccacggacgtggat
ggcgacaccctgagctacagcctctccggcaccgatgccgccttactcgacatcgacgcc
acgagcggcgaggtcacactcaagagcccggccgattttgagaccaagcccagctacagc
ttcaacgtcatcgccaccgacgatggcagcggcacgctcagcgacagccaagcggttacc
gtcagcgtcaccgacgtcaatgaagcaccgaccatcaccagcggcgacactggttcggtc
gccgagaacgccgccaccagcacggtcatctacaccgccaccgccacggacgtggatggc
gacaccctgagctacagcctctccggcaccgatgccgccttactcgacatcgacgccagc
accggcgaggtcaccctcaagaacccggctgattttgagaccaagcccagctacagcttc
aacgtcctcgccaccgacgatggcagcggcgcactgagcgacacccaggcggtcaccgtc
agcgtcaccgacgtcaatgaagcgcccagcatcaccagcggcgataccggctcggtcgag
gaaaacgccgccaccagcacggtcatctacaccgccactgccacggacgtggatggcgac
accctgagctacagcctctccggcaccgatgccgatctgctcgagatcgacgccaacagc
ggagcggtcaccctcaaggccagcgccgactatgagacccaggccagctacagcttcaac
gtcatcgccaccgacaatggcagcggcgcactgagcgacacccaggcggtcaccgtcaat
gttgtcaacctcaacgacgtcgccaccggcagcgtcagcatcgacggcactgccacccaa
ggcgaagtccttactgccaacaccagcaccctagccgatgccgatggcctcggcagcttc
agctatgtctggaaggccgatggcagcatcatcgacggcgccagcgccagtacctacaac
ctgacccaagccgaagttggcaaggcgatcagcgtcgaggtccgctacaccgaccagcaa
ggcaccgccgaaggccccatcactagcaccgccaccgacccggtcaccaacctcaacgac
gcccccgagatcacttccaacggcgggggcgacacggcagcgttcagcgtggctgagaac
agcatcaacgtcacccaggtcatcgccttcgatatcgatggtgatccactcggctttgcc
atcactggcggtgccgaccagggcggctttagcatcgatgccaacagtggagtactgacc
ttccagagcgcgccagacttcgagaacccgggcgacagcgatcgcgataaccgctacgag
gttgcggttcaggtcagcgatggtaatggaggcagcgatacacaaaccatcagcgtcact
atcactgacgttgctgaacctgcccccgagccagaacccgagccagagccagagccagag
ccagagcccatcatccccccatccgaggactgggacgcactacccgacgacgacggcgac
ggcgtgcctgaggtggtcgaagacttcgtgcctgcactgatcgaaggcggcgccaccggc
gatggcaatggcgacggcattctggaccgcgagcaggccgatgtcgcctcggtgccgatt
cgccagaccgaccaggtctcggtgaatccagatgccccgagcatcttcgtcaccttagtc
ggcggggtctctaccgatggcggcagcggcagcgcgccaatgcccgagggcggcgtcctg
atccgcggcctgacccagcgtgacgcccccgccgatcgccccaccgatctctccatgccg
ctcggcctgatcggcttcgatgccgagatcaccaacggttcaattgccgtccccttcagt
ctgctggtcgacggcaacctcggggtcaacggattctggaaacagaccagcgacggtgac
tgggtgaatctggccagccccgagttcggcggccaagtcgtcaccgaaggcgcgatgacc
cgcctggacttcgtgatcgaggacaatggcctgtttgataccaaccccgccattggatcg
atcaccgaccccggcgcgccgggctatcgtgagccgctcgagccgccacccaccgactgt
ccctatcggccgttccaaccggacagcgatggcgacggcgtgcccgatgacctggaggcc
aggctcgggctcgacccggcgctaaaagacaatgatgtcttcaatgacagcgccctgttt
gtccagcaactgtatcgcgatctgctctggcgcgaaggcgaggatgccggggtcgcgtat
tggacgggcgccctggaggctggggcgaaccacgagcaggtcgtcatggcctttctcgac
gcgccggaatatcaggccacggcgggcctgattgggcgtttctacgagggcgccctcggg
cgcgcgccggatgcctgtggtctggactgctgggttgcgcaagcacaggccggcgtgccg
atggaacagatcgccgaggccttcctgcagtcctctgagttcgtcgatcagcagggtgcg
ctgaccagtacctcgctggttgaaacgctgtttggcgcgatgctgcaacgtgctccgagc
gagacagaactcagtacctggagtcaagccctggaaagcggcacctcagcgggcgcgttg
ctgctggacctggcgcaacagcccgagtacttagcgctgcaggaagacagcctgctgctc
aacagtctgtatctctccaccttggatcgcgcgccggatgaggccggcctggcctggtgg
cagagccaactcacccagagcgatgataaccttggtgccatcgctgggttcatcaccagc
cgcgagtatcagcagcgattcgtgccggcggcgtctgacagtccagccagtgggtttgat
gacggcgctgcgctgggcctgcttggccagtcggagcctgccgatctaggaggggtgctg
ctgggatag
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