Thiorhodovibrio winogradskyi: Thiowin_04687
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Entry
Thiowin_04687 CDS
T09736
Name
(GenBank) Cadherin domain protein
Organism
twg
Thiorhodovibrio winogradskyi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4347
Cadherin
Trypan_PARP
DUF4214
Cadherin_4
Big_9
GEX2
Cadherin_5
Cadherin_CELSR2_9th
CshA_repeat
Ig_CLSTN
Motif
Other DBs
NCBI-ProteinID:
WPL19554
UniProt:
A0ABZ0SGE4
LinkDB
All DBs
Position
4973532..4981667
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AA seq
2711 aa
AA seq
DB search
MTSYTTSARSENAGATPTEFDAATFTGFSTLLEAASLDSPVMDTSRSEVVFIDGAIADYQ
TLLDGIDPNAEVVLLDAKRDGIQQMAEYLSGREGIDAVHLISHGSTGQVHAGNARLSEAT
LEQYREELATIGQALTEDGDLLLYGCHIGAEDIGADFITRIAEMTSADVTASKDPTGADK
FGGNWKLEVAAGEIEAKLPFTGITLDRFNTLLATTYSFEDAFGGDQTAQSTLTVSGFQFA
TYDSLGSSVADLNWYNGTGSTADGFDKSDFFVAGLQIPGPTFADELRISSSDGNNFRLTS
FWARAEGEDQEGNHVVTAYSDGNFVGTVTISIPYYGTDNNFGNIFDFSANTNFQNIDEFR
IRGNSTGVYFGFDQMVVDAAVSPNAAPAVTLPTTPTVNEDSSGNAISGILIADTDNDNQT
VTLTATNGALALTGNGGATVTDNDGSDGTLAFNGTVSQVNTALGNLTFTPTADFAGSATI
QIQTNDGNGGTDDETLNVTVTTVNDAPLLDAAATPVLTAVEEDAGAPTGAVGTPVTSLVE
IGSGLNNVTDVDTGAQTGVAITGLAAGLNLWYSINNGANWTQFGSALADAMALVLFADAN
TRIFLQPTTSNFNGTVTDAISFHAWDRTGGFANGATVNVTTAGTGGITPFSSATDTANLA
VTAVNDVPIFTGLDDTPIYTEGGSAVMLDGDVLVADTELDALNSGSGNYNGASVTLARNA
GANAQDVFSNSGLLGTLTQGASFSYDSTEVGTVTTNSSGTLKLTFNANATSALVDSVLQS
IAYSNNSNDPPASVTLDWTFNDGTADSSGSNQTAVTITPVNDAPTLTANGSDPAFNEDEA
AVTLFSAASASTVESGQTFTGLTLTVTNVTDGASEILSIGGTDVPLIPTDGSLIAITGGG
SAAVTLDGSTATVTVTDMTRDAAALQSLVEGISYRNISDDPTIADRIVTITSLTDSGGTA
NGGVETAHLTIASTLSLTAVNDAPVLVLSETTQGFETSDSLTSNFNDGNATPVMSWSETA
GLSGGGGVSIPGGTSEVWTANQGLTLVIGETYTLSTFAYISGNSGYGGLGFAVNDSNLPG
STTAGTNGFNLGIGFHGGGGSYINDDSETNLSWTGTSGGDALVTGNWYRLSYAITPTGSN
SFEVSFEIWNSDASGVVGTRAADPVSTTLTNPHLTEGLTVYPYFSNNGSRLGVIDDFTVT
SFSSGYALTATDEDTTSTSTAVSTILSGLGYSDSDSAQSGAAISETTGNGTWQYSTDGGS
TWTAVGAVSASAALLLDADQLLRYVPDGVSDETATLTLRGWDQSSGAPGTTADTSSNGGS
TAFSATTGTVSISVTEVNDAPTLSANGSDPTFTEDGSAVILFSDASASTAESGQTFQGLT
LTVTHVSDSAESLAIDGSTVELKNDASGTTTNNSLSYSVSVAAGTATVTLSGGTLAAADL
QTLIDGISYSNSSQNPSTANTREVTITSIQDSGGTADGGVDTAAPNIGSTVTLVAVNDAP
VIANLDADNPSFVVGASSPVKLDTGDAATLTDVDHSSFGHSGFLLVTQSSSGSIATGNLS
FDGTTVKAGADGVVTSGERVTVNGTDIGVVTTIAAADNTIHDLLKITFDTGAATPALIST
LLQNLSYTETPSNTAIGDRRFDISVNDGEESSSVATVTLTGAAAPTLTSATYDWASGQLL
VTGTDFIAQPGDDNDIDVSKLSLVGEGGDSVTLTSSPVEISSATQFSVTLNAADQDAVNQ
IFNKNGASSTGGTTYNLTAAEDWAAGVEASITLADLTGNGITVSNVAAPTIASATYNGRT
GVLEVTGSGFLKRDGADNDIDASRFTITGEAGNTHTLTDTADVEITSATRFSLTLSETDK
TAVNALINQNGTASSDNTTYNLAATENWALGADTAVDVADLTGNGITATVNQPPLITSDL
GGDTAAVDAVENSTAVTTVTATDGDDDTVTFSITGGADQDLFQIDANSGVLSFKTAPDFE
NPSDSDNSYEVVVQASDGYGGSDTQSITATVTDVNEAPTITSGDTGSVEENAATSSVIYR
AQATDPDAGQTLTYSLGGTDADLLTIDANSGAVTLKASADFETKPSYGFTVIATDNGSGS
LSDTRAVTVNVVNLNDVATGSVSIDGTATQGEVLTANTSTLADADGLGSFSYVWKADGSI
IDGASASTYTLTQAEVGKAISVEVRYTDQQGTAEGPITSTATDPVTNLNDAPEITSNGGG
DTAAFSVAENSINVTQMTGFDIDGDPLSFAIVGGADQARFGINPDTGVLTFLNAPDFESP
DDSDRDNRYEVAVQVSDGNGGSDTQTISVTITDVAEPAPEPEPEPEPEPEPEPEPEPEPE
PEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPIIPPPEDWDELPDDDGDGVPEVVEDFVPA
LIEGGATGDGNGDGIPDREQADVASVPIRQTDQVSVNPDAPSIFVTLVGGVFADDGSGSA
PVPEGGVLIRGLTQRDAPADRPTDLAMPLGLIGFDAEITNGSTAVPFSLLVDGALGVNGF
WKQTSDGDWVNLASSEFGGQVVTVGAMTRLDFVIEDNGLFDTNPAIGSITDPGAPGYREP
LEPPPTDCPYRPFQPDSDGDGVPDDLEARLGLDPALKDNDVFNDSALFVQQLYRDLLWRE
GEDAGVAYWTGALEAGANHEQVVMAFLDAPEYQATAGLIGRFYEGALGRAPDACGLDCWV
AQAQAGVPMEQ
NT seq
8136 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtatacgacctcagcgcggtcagaaaatgccggtgccaccccgaccgagttt
gacgcggcgacctttactggtttctctactctgctagaagcggcgtcgcttgattcgccg
gtgatggatacctcccgcagtgaagtcgtgttcatcgatggcgccattgccgattatcag
acactgctggacggtattgatcccaacgccgaggtggttctgctggatgccaagcgcgac
ggtattcaacagatggcggaatacctgagcgggcgcgagggcatcgacgcagtgcatctg
atcagccacggcagcaccgggcaagtgcatgccggcaatgccaggctttccgaggcaacg
cttgagcagtaccgcgaggagctggcgaccatcggccaggcgctgaccgaggacggggat
ttgctactctatggctgccatatcggggccgaagacatcggggctgacttcattactcgg
attgcggagatgaccagcgcggatgtgacggcatcgaaggatccgaccggggctgataag
ttcggtggaaattggaaattggaggtcgccgccggggagattgaggcgaaactacccttc
acaggaataacgcttgaccgttttaacaccctgctagcgacgacctatagctttgaggat
gcgttcggcggcgatcagaccgctcaatcaacgctgacagtgagtggcttccagttcgcg
acctacgacagtttgggtagctcggttgcggacctgaactggtataacggcactggttcc
acagctgatggattcgacaagtctgattttttcgtcgccggtctacaaatccctgggcct
actttcgccgatgagcttcgtatcagcagtagcgatgggaacaactttcgattaacaagt
ttttgggcgcgcgccgagggtgaagatcaggaaggcaaccatgtcgtcaccgcatacagt
gacggtaattttgttggaacggtgaccatctccatcccttattacggtaccgataataac
ttcggcaacatctttgatttttcagccaataccaacttccagaatattgacgagttccgt
attcgcggcaatagcacaggtgtctatttcgggtttgatcagatggtggttgatgcagcg
gtgtctccaaatgccgcgccggctgtcaccctgccaacaacgcccacagtcaacgaagac
agcagtggcaacgcaatttctggcatcttgatcgccgacactgacaacgacaatcaaacc
gtgacgctgaccgccaccaatggcgccctcgcgctgacgggcaatggcggtgcaacggtg
accgacaatgacggcagcgatggaaccctggcgtttaatgggaccgtttctcaagtcaac
acagccctcggcaacctcaccttcaccccgaccgccgatttcgccggcagcgcgaccatc
cagatccagaccaacgatggcaacggcggcaccgacgacgaaacgcttaatgtaactgtg
acgaccgtgaacgatgcacccttactggatgcggcagcaacaccggtactgacggcggtg
gaggaggatgctggggcgccgacgggcgcggtgggcacgccagtgaccagcctggtagag
atcggcagcgggctgaacaacgtcaccgatgtcgatactggcgctcagaccggggtggcg
atcaccggcctggcggccgggctgaatctctggtactcgatcaacaatggcgccaactgg
acgcagttcggcagcgcactggccgacgccatggcgctggtgctgttcgccgacgccaac
actcgcatcttccttcagccgaccacgtctaacttcaacggcacggtcaccgacgccatc
agctttcatgcttgggaccgcaccggcggcttcgccaatggcgccacggtgaacgtcacc
acggctggcactggcggcataaccccctttagctccgccaccgacaccgcaaatctggcc
gtcacggcggtcaacgatgtgccgatctttactggcctggatgatacgcccatttacacc
gaaggcggcagcgcggtaatgctggacggtgatgtgctcgtggccgataccgaactggat
gcactgaacagcggcagcggcaactacaacggtgccagcgtcactcttgcccgcaatgct
ggagccaacgcgcaggatgtcttcagcaatagcggcttgctcggcaccctgactcagggg
gcttccttcagctatgatagcaccgaggtgggcactgtcaccaccaacagctcgggcacc
ctcaaactgaccttcaacgccaatgccacctcggcgctggttgatagcgtgttgcaaagc
atcgcctacagcaacaactccaacgacccacccgccagcgtcaccctggactggaccttc
aacgacggcaccgccgacagcagtggcagcaaccagaccgcagtgaccatcaccccggtc
aacgacgcacccacgctcaccgccaacggctctgatccggctttcaacgaagacgaagcc
gccgtcaccctgttcagcgccgcctcggccagcaccgtggaaagcggccagactttcacc
gggctgaccctgacggtgacgaatgtgactgacggagccagtgagatcctgtccattggc
ggcaccgatgtgccactgattcccaccgacggcagcctgattgcgatcactgggggtggc
agtgccgccgtgaccttggatggcagcacggcgaccgtcacggtcaccgacatgacccgc
gatgccgcagccctgcaaagcctggtcgagggcatcagctaccgcaacatcagcgatgat
cctacgattgctgatcggatagtcaccatcacctcgctgaccgactccggtggcaccgcc
aatggcggagtggaaaccgctcatctgaccatcgcctccaccctcagcctgacggcagtc
aacgacgcccccgtcctcgtgctcagcgagaccacccagggcttcgagacctccgacagc
ctcaccagcaacttcaacgacggtaacgccacgccggtgatgtcctggagcgagaccgcc
gggctctccggcgggggcggcgtgagtatccccggcggcaccagcgaggtctggacggcc
aaccaaggcctcaccctggtcatcggcgagacctacaccctatcgacctttgcctatatc
tctggcaacagcggctatggcggcctaggctttgcggtcaacgacagcaacctccctggg
tccaccactgcgggcaccaacggcttcaacctcggcatcggctttcacggcggcggtggg
tcgtacatcaacgacgacagcgagaccaacctctcctggaccggcaccagcggcggggat
gccctggtcaccggcaactggtatcggctgagctacgccatcacccccactggcagcaac
agctttgaggtcagcttcgagatctggaacagcgatgcctctggcgtggtggggactcgg
gcggcggatcccgtttccaccaccctgaccaacccccatctcaccgaggggctgacggtc
tatccctatttctccaataacggcagccgcctgggcgtgatcgacgacttcaccgttacc
tcgttcagcagcgggtacgccctcaccgccaccgacgaagacaccaccagcacctcgacc
gccgtaagcaccatcctatccggcctgggctacagcgacagcgactcggcgcaatccggg
gcagccatctccgaaaccacgggcaacggcacctggcaatactcgaccgacggcggcagc
acctggacagcggtgggcgcggtgagcgcctccgcggccctgctgctggatgcagaccaa
ctgctgcgctatgtgcccgacggggtcagcgacgaaaccgcgaccctaactctacgtggc
tgggaccagagcagcggcgcacccggtaccacggcggacaccagcagcaacggcggcagc
accgccttctcggccaccaccgggactgtcagcatttcggtcaccgaggtcaacgatgcc
cccacgctttcggccaacggctctgatcccaccttcaccgaagacggcagcgccgtcatc
ctgttcagcgatgcctcggccagcacggcggaaagcggccagaccttccagggcctgacg
ctgacggtcacgcatgtctccgacagcgcggagtcacttgccatcgacggcagcacggtc
gaactgaagaacgacgcatcaggcaccaccaccaacaacagcctgagctacagcgtcagc
gtggccgccggcacggccacggtgacactctcgggcggcacgctcgccgcggccgacctg
caaacactgatcgacggcatcagctacagcaacagcagccagaaccccagcaccgccaac
acccgagaggtgaccatcacctcgatccaggacagcggcggcaccgccgacggcggggtc
gataccgccgcgcccaacatcggctcgacggtgacgctggtggcagtgaatgatgcaccc
gtgatcgccaatctggacgctgacaacccgagctttgtcgtcggcgccagcagcccggtc
aagctggataccggcgatgccgccaccctgaccgatgtcgatcacagcagctttggtcac
agcggcttcctgctggtcacccaatccagcagtggctccatcgccaccggtaatctctcc
ttcgacggcaccaccgtcaaggccggcgctgatggcgtggtgacctccggcgagcgcgtc
acggtcaatggcaccgacatcggtgtggtcaccaccatcgccgccgcggacaacacgatc
catgacctgctcaagatcaccttcgacaccggcgccgccaccccggcgctgatcagcacc
ctgctgcaaaacctctcctacaccgaaacgcccagcaacaccgcgataggtgatcgccgc
ttcgacatcagcgtcaatgatggtgaggagtcctcatcggtcgcgaccgtgaccctcacc
ggcgctgccgccccgaccctcaccagcgccacctacgactgggccagcggtcaactgctg
gtgaccgggacggatttcatcgcccagccgggggacgacaacgacatcgatgtcagcaag
ctcagcctggtgggggagggcggcgacagcgtcaccctgaccagcagcccggttgagatt
agcagcgcgacccagttcagtgtcaccctgaatgcggctgaccaagacgccgtcaaccag
atctttaacaaaaacggtgccagctccacgggtggcacaacctacaacctgaccgccgcc
gaagactgggcagccggggtcgaggccagcatcaccctggccgacctgaccggcaatggc
atcacggtcagcaacgtcgccgcgcccaccatcgccagcgccacctacaacggcagaacc
ggcgtgctcgaggtcaccggcagcggattcctcaagcgtgatggcgcggacaacgacatc
gatgccagccgcttcaccatcaccggcgaagccggcaacacccataccctcaccgatacc
gccgatgtcgagatcaccagcgcgacccgcttcagcctgaccctgtcggaaaccgacaaa
accgccgtcaacgccttgatcaaccaaaacggcaccgcgtcaagcgacaacaccacctac
aacctggcggctacggaaaactgggcattgggtgccgatacggcggtcgatgtcgctgat
ctgacgggcaatgggatcaccgcgactgttaaccaaccgccgctgatcaccagcgacctc
ggcggcgacaccgctgccgtggatgcggtggaaaacagcaccgcggtcaccaccgtcacc
gccaccgatggcgacgatgacaccgtcaccttcagcattaccggcggcgccgaccaggac
ttgttccagatcgatgccaacagcggtgtgctgagtttcaagaccgccccggacttcgag
aacccgagcgacagcgacaacagctatgaggtcgtggtgcaagccagtgacggctacggc
ggcagcgacacacagagcatcacggcgaccgtcaccgacgtcaatgaagcgccgaccatc
accagcggcgacactggctcggtcgaggaaaacgccgccaccagctcggtgatctacaga
gcacaggcgactgatcccgacgctggccagacattgacctatagcctcggcggcaccgat
gccgacctgctcacgattgacgccaacagcggggcggtcacactcaaggctagcgccgac
tttgagaccaagcccagctacggcttcaccgtcatcgccaccgataacggcagtgggagc
ctgagcgacacccgggcggtcactgtcaatgttgtcaacctcaacgacgtcgccaccggc
agcgtcagcatcgacggcactgccacccaaggcgaagtcctcactgccaacaccagcacc
ctggccgacgccgacggcctcggcagcttcagctatgtctggaaggccgatggcagcatc
atcgacggcgccagcgccagtacctacaccctgacccaagccgaagttggcaaggcgatc
agcgtcgaggtccgctacaccgaccagcaaggcaccgccgaaggccccatcactagcacc
gccaccgacccggtcaccaacctcaacgacgcccccgagatcacttccaacggcgggggc
gacacggcagcgttcagcgtggccgagaacagcatcaacgtcacccaaatgacgggcttt
gacatcgacggcgatccactcagtttcgcgattgttggtggcgccgatcaggcccgcttt
gggatcaatccagatacaggcgtcttgaccttcctcaacgcgccagacttcgagagcccg
gacgacagcgatcgcgataaccgctacgaggtcgcggttcaggtcagcgatggtaatgga
ggcagcgatacacaaaccatcagcgtcactatcactgacgttgctgaacctgcccccgag
ccagaacccgagccagagccagaacccgagcccgagccagagccagagcccgagccagag
ccagagccagagcccgagccagagccagagccagagccagagccagagccagagccagaa
cctgaacctgaacctgaacccgaacctgagcccatcatccccccacccgaggactgggac
gaactacccgacgacgacggtgacggcgtgcctgaggtggtcgaagacttcgtacctgca
ctgatcgaaggcggcgccaccggcgatggcaatggcgacggcattccggaccgcgagcag
gccgatgtcgcctcggtgccgattcgccagaccgaccaggtctcggtgaatccagatgcc
ccgagcattttcgtcaccttggtcggcggggtctttgccgatgacggcagcggcagcgcg
ccggtccccgagggcggcgtcctgatccgtggcctgacccagcgtgacgcccccgccgat
cgccccaccgatctcgccatgccgctcggcctgatcggcttcgatgccgagataaccaac
ggttcaacggccgtccccttcagtctgctggtcgacggcgccctcggggtcaacggcttc
tggaaacagaccagcgacggtgactgggtgaatctggccagctccgagttcggcggccaa
gtcgtcaccgtaggcgcgatgacccgcctcgacttcgtgatcgaggacaatggcctgttt
gataccaaccccgccattggatcgatcaccgaccccggcgcgccgggctatcgtgagccg
ctcgagccgccacccaccgactgtccctatcggccgttccaaccggacagcgatggcgac
ggcgtgcccgatgacctggaggccaggctcgggctcgacccggcgctaaaagacaatgat
gtcttcaatgacagcgccctgtttgtccagcaactgtatcgcgatctgctctggcgcgaa
ggcgaggatgccggggtcgcgtattggacgggcgccctggaggctggggcgaaccacgag
caggtcgtcatggcctttctcgacgcgccggaatatcaggccacggcgggcctgattggg
cgtttctacgagggcgccctcgggcgcgcgccggatgcctgtggtctggactgctgggtt
gcgcaagcacaggccggcgtgccgatggaacagtga
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