Thiorhodovibrio winogradskyi: Thiowin_04896
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Entry
Thiowin_04896 CDS
T09736
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thiowin_04896 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twg03019
]
Thiowin_04896 (recQ)
03400 DNA repair and recombination proteins [BR:
twg03400
]
Thiowin_04896 (recQ)
Enzymes [BR:
twg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thiowin_04896 (recQ)
Messenger RNA biogenesis [BR:
twg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Thiowin_04896 (recQ)
DNA repair and recombination proteins [BR:
twg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Thiowin_04896 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
BTRD1
DNA_pol_A_exoN
ResIII
Motif
Other DBs
NCBI-ProteinID:
WPL19752
UniProt:
A0ABZ0SIJ7
LinkDB
All DBs
Position
complement(5247357..5249168)
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AA seq
603 aa
AA seq
DB search
MAETPLQILNRVFGYPAFRGQQQAVIERLMAGGDALVLMPTGGGKSLCYQIPALLRPGTG
IVVSPLIALMQDQVDALRQLGVRAAFLNSSLARDQSERTEQALLAGQLDLLYVAPERLLT
ERFLALLGRLPIALFAIDEAHCVSQWGHDFRPEYVQLDLLHKRWPLVPRVALTATADAPT
RKEILTRLRLPLEAQFVSSFDRPNIRYRIVEKRSPRQQLLRFLKREHPGDAGIVYCRSRR
GVDETAEFLCDQGFQAVPYHAGMSAEQRRANQARFLREEGLITVATIAFGMGIDKPDVRF
VAHLDLPKSLEAYYQETGRAGRDGLPADAWMTYGLGDLVMLRRFIDESGAEEHFKRLEHQ
KLDNMLGFCETTECRRQALLNYFGEPLPDPCGNCDTCLEPVPTWDGTVAAQKALSCIFRT
GQRFGASYLTEVLLGKTNERMRRFGHDQVSTHGIGRELNADQWRSVYRQLVAAGFAAVDV
EGHGGLRLTEKSRPLLRGERSIRLRQDPDKQAQKRATRTPVSVTPSDPEARALWEALRAH
RGKIARELDVPAFVVFGDATLREMLAHRPRNREEFGRISGVGQVKLERFADGFLQVLAAH
RAR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaccccgttacagattttgaaccgcgtcttcggttaccccgcctttcgcggc
cagcagcaggcggtgatcgagcggctcatggccggcggggatgccctggtgctgatgccc
accggcggcggcaagtcgctctgttatcaaattccggctctactgcgcccgggcaccggg
attgtggtgtcacccctgatcgcgctgatgcaggatcaggtcgacgcgctgcgccagctc
ggggtgcgcgcggcctttctgaactcctcgctcgcgcgcgaccagtccgagcgcacggag
caagcgcttcttgccggccagctcgacctgctctatgtcgcgcccgaacgtctgctgacc
gagcgctttctggcgctgctcgggcgtctgcccattgcgctctttgccattgacgaggcg
cactgcgtgtcccagtggggacatgacttccgcccggagtacgtccagctcgatctgctg
cacaagcgctggccgctggtgccgcgcgtggccctaaccgccacagccgatgccccgaca
cgcaaggaaatactcacccggctgcggttgccgctcgaggcccagttcgtctccagcttc
gaccggccaaatatccgctaccgcattgtcgaaaaacgcagtccgcgccagcaattgctg
cgatttctcaagcgcgagcaccccggggatgccggcattgtctactgccgttcgcgtcgc
ggtgtcgatgagacggctgagttcctgtgcgaccagggctttcaggccgtgccctatcat
gccggcatgagcgccgagcagcggcgcgccaatcaggcgcgttttctgcgcgaggagggg
ctgatcacggtcgccaccatcgcctttggcatgggcatcgacaagccggatgtgcgcttt
gtagcccatcttgacctgcccaagagcttggaggcctactatcaggaaaccggccgcgcc
gggcgcgacgggctaccggccgatgcctggatgacctatggcctgggcgatctggtcatg
ttgcggcgtttcatcgacgaatccggcgccgaggaacacttcaaacgcctggaacaccaa
aagctcgacaacatgcttggattctgcgagaccaccgagtgtcgccgtcaggcgctgctc
aactatttcggcgagccgttgcccgacccttgcggcaattgcgacacctgtctggagccg
gtgccgacctgggatggcacagtggcggcgcaaaaggccttgtcctgcatcttccgcacc
ggccagcgctttggcgccagctatctgaccgaggtgctgctcggcaagaccaatgagcgc
atgcgccgtttcgggcacgatcaggtcagcactcacggcatcgggcgcgaactcaatgcc
gatcagtggcgctcggtgtatcgtcagttggtcgcggcgggctttgccgccgtggatgtc
gaggggcatggcggcctgcgcctgacagagaaaagccgcccgctgctgcgtggcgagcgg
agcatccgcctgcgtcaggatccagacaaacaagcccagaaacgcgccacccgcacccct
gtgagcgtcacgcccagcgatcccgaggcgcgtgcactctgggaagcgctgcgcgcgcat
cgcggcaagatcgccagggagctcgacgtgccggccttcgtggtgtttggcgatgcgacc
ttgcgcgaaatgctggcgcatcgcccgcgcaatcgggaggagtttgggcgcatcagcggg
gtggggcaggtcaagctcgagcgctttgccgatgggtttttgcaggtgctagccgcgcat
cgggcgcgataa
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