Thiorhodovibrio winogradskyi: Thiowin_04940
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Entry
Thiowin_04940 CDS
T09736
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase I precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thiowin_04940 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twg03019
]
Thiowin_04940 (pcnB)
Enzymes [BR:
twg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Thiowin_04940 (pcnB)
Messenger RNA biogenesis [BR:
twg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Thiowin_04940 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
WPL19796
LinkDB
All DBs
Position
complement(5292021..5293334)
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AA seq
437 aa
AA seq
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MPRPEHSISRANISANAVRVLNRLKQSGYQAYLVGGGVRDLLLGHEPKDFDVATDARPED
VRRVFRNCRLIGRRFRLAHVFFGAEIVEVATFRAANVDLGDEDARQIENGMILRDNVFGS
IAEDALRRDFTVNALYYNIADFSLVDYVGGLADIADGRLRLIGDDPIARYREDPVRMLRA
VRFACKLGFVIEPQCEAPLVELAPLLRDVPPARLFEEILKLFQAGFALPAFEKLRHYGLF
AELFPETEDCLAMEEEDFPITFVNRGLDNTDRRVQEGKPIAPFFLFAVLLWEPVRRQYLQ
LLEAGHGWSEAMTLASGMIAGRQQGSVAIPKRFGLPMREIWALQPALERRQGKRPLALIG
HPRFRAAYDFLLLRAESGEVDPELAAWWTQFQGVNPSERAAMTAERKSGRGSRRRRRRKA
PAGQPATDPSDQAAPPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgtccggagcacagcatttcgcgtgcgaatatcagcgcgaacgcggtcagggtg
ctcaatcgcttgaagcagagcggctatcaggcctatctggtcggcggtggcgtgcgcgac
ttgctgcttggccatgagccaaaggatttcgacgtcgccacggacgcgcggcccgaggat
gtgcggcgggtgtttcgcaactgccggctaatcgggcggcgatttcgcctggcgcatgtt
ttctttggcgcggagatcgttgaggtcgcgacatttcgggcggcaaatgtcgaccttggc
gacgaggacgcgcgccagatcgaaaacggcatgatcctgcgcgacaatgtgtttggctcc
atcgccgaggatgccttgcgacgggatttcaccgtcaatgcgctctactacaatatcgcc
gatttctcgctcgtcgattatgtcggggggcttgcggacatcgccgatgggcggttgcgg
ctgattggcgatgatccgatcgcccgctatcgcgaagacccggtgcgcatgctgcgcgcg
gtgcgctttgcctgcaagctcggctttgtgatcgagccacaatgcgaggcacccttggtt
gagttggcgccactgttgcgggatgttccaccggcgcgcttgtttgaagagattctcaag
ttgttccaggcgggctttgcactgccggccttcgagaagctgcgccactatgggctcttt
gccgaactcttccccgagaccgaggattgcctggcgatggaagaggaggactttcccatc
accttcgtgaaccggggcctggataacaccgatcgccgtgttcaggagggcaagccgatc
gcgccattctttctttttgccgtgcttttgtgggaaccggtgcggcgtcagtacttgcaa
ttgctcgaggcgggacatggctggtcggaggccatgaccctggcctcgggtatgatcgcc
ggacgtcagcagggctccgtggcgattcccaagcgcttcggtctgccaatgcgtgagatc
tgggcgttgcagccggcgcttgaacgccgccagggtaaacggcccttggcgttaattggc
catccgcggttccgcgccgcctatgattttctgctgctacgggctgagtccggcgaggtc
gacccggaactcgctgcctggtggacgcagttccagggggtgaacccgtcagagcgcgcg
gccatgacggcggagcgcaagtccgggcgcggcagccggcgcagacgtcgacgcaaggca
ccagccggtcagcccgcgaccgatccctcggatcaggcggcgcctccggcctga
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