Thiorhodovibrio winogradskyi: Thiowin_04997
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Entry
Thiowin_04997 CDS
T09736
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
twg
Thiorhodovibrio winogradskyi
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twg03009
]
Thiowin_04997 (rluD)
Enzymes [BR:
twg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Thiowin_04997 (rluD)
Ribosome biogenesis [BR:
twg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Thiowin_04997 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WPL19850
LinkDB
All DBs
Position
complement(5351817..5352776)
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AA seq
319 aa
AA seq
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MTAPLHWQLPPGAVGRRLDQVLAELLPEYSRGRIQHWLDTGQLLVDGQSRRRRDKVRGGE
RVCLRTDPVLEVQTAAPAQQIDIPLVHEDEHLLVINKPAGLVVHPGAGQPDGTLLNALLH
RNPGLATLPRAGIVHRLDKDTSGLMVVAKSLLAHRSLVNQLQARLVHRDYRALVRGDLIS
GGTVDQPIGRHPQARTKMAVVASGRPAVSHYRVLTRFGHCTLLGVRLETGRTHQIRVHMA
HLRHPLVGDPVYARARQPFPAQAAAAQALRAFPRQALHAIGLALAHPASGEPLRWEIPMA
PDLARLLAALEQPLPEGHQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccgcttcactggcaactcccgcccggcgcggttgggcggcgactcgatcag
gtgctcgccgaattgctgccggagtactcgcgcgggcgtatccagcactggctggacacc
ggccagttgctggtggatggccagtcgcgccggcggcgcgacaaggtgcgcggcggtgag
agggtttgtctgcgcacagatccggttttggaggtacaaaccgccgcaccggcgcagcag
atcgatatcccgctggtgcatgaggacgagcacctgctggtcatcaacaaaccggctggg
ctggtggtgcatcccggcgctggtcagcccgacgggacgttgctcaacgccctgctgcat
cgcaatcccgggttggccaccctgccacgtgccggcatcgtgcaccgtctcgacaaggac
accagcggactcatggtggtggccaagtcgcttcttgcccaccggtccctggtcaaccag
ttgcaggcgcgcctggtgcatcgcgattatcgcgccctggtacgcggggatttgatcagc
ggcggcactgtcgatcagcccattggccgtcatccccaggcgcgcaccaaaatggcggtg
gttgcctccgggcgcccggctgtcagccactatcgggtgctaacacgtttcggacattgc
accctgcttggcgtgcggctggaaactggccgtacccatcagattcgggtgcacatggcc
catctgcgtcatcccctggtgggtgaccctgtctatgcccgcgcgcgccagcccttcccg
gcacaggcagcggcggcgcaggcgctgcgcgcttttccgcgtcaggcgctgcatgccatc
ggcctggcgctggcgcatcccgcgagtggcgaacccctgaggtgggagattcccatggcg
cctgatcttgcgcgcttactggccgcccttgagcagcccttgccggagggtcatcaatga
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