Thiorhodovibrio winogradskyi: Thiowin_05089
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Entry
Thiowin_05089 CDS
T09736
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
twg
Thiorhodovibrio winogradskyi
Pathway
twg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Thiowin_05089 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twg03400
]
Thiowin_05089 (xseB)
Enzymes [BR:
twg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Thiowin_05089 (xseB)
DNA repair and recombination proteins [BR:
twg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Thiowin_05089 (xseB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
Phage_TAC_11
Motif
Other DBs
NCBI-ProteinID:
WPL19934
LinkDB
All DBs
Position
5449483..5449866
Genome browser
AA seq
127 aa
AA seq
DB search
MAKTEKKPTAADPSDRPAASLIDANDTLALGSYIKEPSTEEASNGEVSPDPAQFEQSLSE
LEALVDRLEQGDLILEDALASFEHGVHLSRDCQRALDAAEQRVRILTDASNEPITETSAK
PIPFEPG
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaaaccgagaaaaaacccaccgccgccgacccctccgaccgacctgccgcgtcc
ttgatcgacgccaatgacacgctagccctgggttcttacatcaaggagccgagtactgaa
gaggcaagcaatggcgaagtaagcccggatccggcccaattcgagcaatccttgtcggag
cttgaagcgctggtggaccgccttgaacaaggcgatctcatacttgaggatgcccttgcc
agcttcgagcacggcgtgcatctcagccgcgattgccaaagagctctcgacgcagccgaa
cagcgcgtgcgtattctgaccgacgcatccaacgagccgataaccgagacttcggccaag
ccgatacccttcgagcccgggtga
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