Tropheryma whipplei Twist: TWT_006
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Entry
TWT_006 CDS
T00116
Symbol
gyrA1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
twh
Tropheryma whipplei Twist
Brite
KEGG Orthology (KO) [BR:
twh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twh03032
]
TWT_006 (gyrA1)
03400 DNA repair and recombination proteins [BR:
twh03400
]
TWT_006 (gyrA1)
Enzymes [BR:
twh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TWT_006 (gyrA1)
DNA replication proteins [BR:
twh03032
]
Prokaryotic type
DNA Topoisomerases
TWT_006 (gyrA1)
DNA repair and recombination proteins [BR:
twh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TWT_006 (gyrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AsnC_trans_reg_3
Exo70_N
Motif
Other DBs
NCBI-ProteinID:
AAO44103
UniProt:
Q83H53
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All DBs
Position
6438..8897
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AA seq
819 aa
AA seq
DB search
MSEQNINQVDLREEMQRSYLDYAMSVIIGRALPDVRDGLKPVHRRVLYAMYKGGYRPEKA
FSKCARVVGDVMGQFHPHGDAAIYDALVRLVQPWAMRYPLAQGQGNFGSPGNDGAAAPRY
TETKMATLAIEMVRDIDEDTVDFSPNYDGESVEPTVMPCRFPNLLVNGSVGIAVGMATNI
PPHNLAEVSAGALWCLENPDATDEELTEALLERIKGPDFPTGATVLDTGGIKDAYLTGRG
SVVMRGVVDIEEIDGRTCLVVRELPYQVNPDNLALKIASLVKENKLSGIADIRDETSGRT
GQRLIIVLKRDAVARVVLNSLYKHTQLQENFGVNMLAIVDGAPRTLSLCSFIRLWVEHQI
EVIVRRTTFRLARAEQRAHILRAYLRALDQIDEVIQLIRSSKSAEEAQSNLMALLKIDET
QARAILDLQLRRLAALERQRIISEAREIEELISSFRKILSDKTAQCQVIAEELREIGQKH
SDARRTEIIRGFDGSVSIEDLIPVEPVVVVMTRCGYIKRTRIDQYRSQHRGGRGVKGAQV
KADDVVLQFISTTTHNWLMFFTNTGRVYRAKAYEVPEASREARGQHVANLLPLKPNEAVT
RILSVSNFDSEDTSLVLATKDGYVKKTTLKEYDTSLSTGVIAIKLRPGDKLVSAVLARSD
QDIILVTKNARSLRFKSGTLRPLSRGSYGVKGISLRENDLLLSAELILSDDSYIFVVSER
GYAKRSRVGDYKLQARGGIGVRVANITEQKGVLADMLVVNDDDEVLVILASGKVIRSSVA
EVSPTLRYTTGVVFVRMSDGDKILAMTIAEKCDDLEGQG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgagcaaaatattaaccaagtagatcttcgcgaggagatgcagcggtcgtatctc
gactacgccatgagcgttataatcggtcgtgccttacccgacgtccgggatggtcttaag
cccgtacatcgcagggttttgtacgcgatgtacaaagggggttatagaccagaaaaggct
ttttcaaaatgtgccagggttgtcggcgatgttatgggtcaatttcatcctcatggggat
gcggcaatttatgacgcacttgtccgtcttgtgcagccgtgggccatgcgctatccgctt
gcgcagggccaggggaactttggctctccgggcaatgatggcgctgccgcccctcgttac
acagaaacgaaaatggccacactcgcgattgagatggtcagggatattgatgaggatact
gttgatttttccccaaattatgatggcgaaagcgttgaacccacagttatgccgtgccgc
tttcccaatcttttggttaatggctcagtcggtattgcggttggtatggcaaccaatatc
ccgccgcataaccttgccgaggtgtcggccggtgctctgtggtgcctcgaaaatccggat
gcaacagatgaggagttgacagaagctcttctggaaagaataaaaggtcccgattttccc
accggtgctacggtgttggacaccggaggcataaaagacgcctatctcacgggccgcggc
agcgtggttatgcgaggcgttgttgatattgaagaaatagacggaaggacctgccttgtt
gtgcgcgaacttccttatcaagtcaatccggataatttggctttaaagatagcctctctc
gttaaggaaaataaactttcgggaattgctgatattcgggatgaaacaagcggtagaacc
ggccagcggttgataatcgtcctcaagcgagatgctgtcgctcgggtggttctgaatagc
ctatacaaacatacacagcttcaagagaactttggggtcaatatgcttgcgattgttgac
ggggcacccagaaccctttccctctgttcgttcattcgtttatgggttgaacaccaaata
gaagtcatcgtccggcgcactaccttcaggcttgccagggccgagcagcgcgcgcatatt
ctcagggcctatctaagggctctggaccagatcgacgaggttatacagctcattcgatct
tctaagagcgccgaggaggctcagtctaaccttatggcgctcctgaaaatagacgaaaca
caggctcgtgcaatccttgatcttcagttgcggcgccttgccgccctcgagcgacaaagg
attatctctgaggcaagagaaatagaagagctaatatccagcttcaggaagattctttct
gacaagaccgcccagtgccaggttattgcagaagaattgagggaaataggtcaaaaacac
tcagacgcacgacgcacagaaataattcgggggtttgatgggtcggtgtctattgaagac
ctgattccggtggaacctgtagttgttgttatgacccgctgtggttatataaaacgaaca
cgtattgatcagtataggtctcaacataggggtggtcgcggcgtaaaaggcgcccaagtt
aaggctgatgatgtcgtgctgcagtttatctctacaacaacacacaactggctcatgttt
tttaccaatacagggagggtttatcgcgcaaaagcctatgaagtcccggaggcaagcagg
gaggctcgtggtcagcatgttgcaaatcttcttccgctaaaaccgaatgaggcggtgacc
aggattttatctgtctctaattttgatagcgaggatacaagccttgttttggccactaaa
gatggatatgtgaaaaaaacaacccttaaagagtacgatacatcgcttagcactggtgtt
atagcaataaagcttcggcccggagataagcttgtatctgcagtgcttgcaagaagtgat
caggacatcatactggttacaaaaaatgccagatcgctcaggtttaaatccggtacattg
cgccccttatctaggggatcatacggcgtaaagggtatatctcttcgcgaaaacgatctc
cttctttcagctgagctgattctttcggacgacagctatatatttgttgtcagcgagagg
ggttatgcaaagcgctctagggttggtgattacaaacttcaggcccggggcgggattggc
gtacgggttgcaaacataaccgagcaaaagggcgtacttgctgacatgctcgttgtcaat
gacgatgatgaggttcttgtaattcttgcaagcggtaaggttattcgctcatctgttgcc
gaggtctccccaactcttcgatatactaccggggtcgtttttgtccgcatgtctgacggg
gataaaattctggccatgacgatagcagagaaatgcgatgacctggaagggcaggggtga
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