Tropheryma whipplei Twist: TWT_080
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Entry
TWT_080 CDS
T00116
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
twh
Tropheryma whipplei Twist
Pathway
twh03420
Nucleotide excision repair
twh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TWT_080 (pcrA)
03430 Mismatch repair
TWT_080 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twh03400
]
TWT_080 (pcrA)
Enzymes [BR:
twh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TWT_080 (pcrA)
DNA repair and recombination proteins [BR:
twh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TWT_080 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
TWT_080 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Mac
ACAS_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AAO44177
UniProt:
Q83GZ5
LinkDB
All DBs
Position
88753..90984
Genome browser
AA seq
743 aa
AA seq
DB search
MTIPADLLKGLNPQQVEGVCYRGPTLLISAGAGSGKTKVLTHRIAGFLATGEASCDQILA
ITFTNKAASEMRHRTGDLVGLSVRDMQISTFHSVCVRILRECVGHLGKAKNFTIYDAADQ
RAIIKQICQSTDTFGLTASMVASQIGLLKNQMHTPDTYSRCLASNSTNGNSVTSITLQRE
QFILHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEISAMYRNRWKYLLVDEYQDTNH
AQYRLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIANIVNFENDFPDCHTILLEQNYR
SCQNILLAANALISNNQNRKDKNLWSELGAGEKVIAYCASSAEEEGRFVADRVRHLVDQG
ESLSDIAVFYRSNTQSRVIEESLIRQSIPYRVVGGTKFYERAEIKDILAYLTVIVNPDDT
LALRRILNVPKRGVGTVSENRLVEFASARGITLMQALSRIDEINIQPSAKSALRDLFYLL
NRFAGSSMPANELLDDLLKATDLLSRFNNTDDPQNEARKINIGDFVDSVEDFAKENPGGT
LSDFMTNIALMTSYDQSDDAPGQITLMTLHMAKGLEFDFVFLTGLEEGILPHEMSLKEKN
GIEEERRLAYVGMTRAKKVLHLSFSSYRKRYTDGVRLPSRFWDEIPQHLLRWHSRFTHKR
FTGPLYGFTARPAGESRQSVHVLKNRYPRESFSISDSVKHSVFGVGTVVDVLGLGPKQII
VVEFADKRRSLLASIAPIVKCKQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgacaattccggccgatttactcaagggtttgaacccccagcaggtggagggtgtctgc
tatagggggccaacccttcttatttccgctggcgccggcagtggtaagactaaggtgctg
acccataggattgccggatttctggcaacaggtgaagcatcctgtgaccagatattggcg
attacattcacaaataaggctgcatctgaaatgcgccatcgcaccggggatcttgtcgga
ttatccgtcagagatatgcagatatctaccttccattcagtctgtgtgagaattcttcgt
gaatgtgtcgggcatctaggcaaggcaaagaatttcacgatatatgatgctgcagaccag
cgtgcgattatcaaacaaatctgtcagtctacggatacttttggactaacggcaagcatg
gttgcctcgcaaataggtctgttgaaaaaccaaatgcataccccagacacctattcgcgc
tgtcttgcctcaaattccactaatggcaattcggtaacttcgattaccttacagagagaa
cagtttatcctgcacgtttttaggcgctaccaggagattctgaaagaggcaaatgccttt
gactttgatgatcttatttccgaaacagtttttttactccagaaatccccggagatttct
gcaatgtatagaaaccgctggaagtatcttttggtagacgaatatcaggatacaaaccat
gcccagtataggcttattcttgagctgacaaaaggtgataaaagcgacatgtctctgaca
gctgtcggtgattcagatcagagcatatacgctttccggggtgctgatattgccaatata
gtgaatttcgaaaacgatttcccggactgtcacacaatcttattggagcagaattaccgc
tcttgccagaatattcttttagctgccaatgcgcttatttcaaataatcagaatcgtaag
gataaaaacctgtggagcgagctaggtgccggcgagaaggttattgcatactgtgcatct
tccgcagaagaagaggggcgttttgttgcagatagggtgcgccatctggtcgatcaaggt
gagagcttgtctgatatagcggttttttaccgatccaatactcagagcagagtaatagaa
gaatcgctcatcaggcaatcaattccatacagagttgttggcgggacaaaattttatgaa
cgcgctgaaataaaagatattctggcgtatctgacagtaattgtcaatccagacgatacg
ctggctctcaggcgtattctaaatgttccaaagcgtggtgtcggaacggtatcagagaat
aggcttgttgaatttgccagtgctagaggcataacacttatgcaggcactttctcgcatt
gatgaaattaacattcagccatctgccaaatcagcccttcgggatctcttttacttatta
aatcgctttgccggatctagtatgccggccaatgaactgctcgacgacctgctaaaagct
acagaccttctaagtcgattcaacaacactgatgatcctcaaaatgaggctagaaagatc
aatattggggactttgtagattcggttgaggatttcgcaaaagaaaaccccggaggcact
ctatctgactttatgacaaatattgcacttatgacatcctacgatcagtctgatgacgca
ccgggccagattaccctcatgaccttacatatggcaaagggtcttgaatttgattttgtg
tttctaactggtctggaagagggtatccttcctcacgaaatgtctcttaaagagaagaat
ggcatagaagaagagcgtagacttgcctatgttggtatgacgcgcgcaaaaaaagttctt
cacctttcttttagtagctaccgaaaacgatacacagatggggtgcgcttgccgagtcgt
ttttgggatgaaattcctcagcatctcctgcggtggcacagtcggtttacacacaagaga
tttaccggtcccctgtacgggtttacagcgcgtcccgcaggggagtcacggcaatcagtg
catgttttgaaaaaccgatacccccgtgagagtttttctatttcggatagtgtaaagcat
tccgtttttggtgttggaacggtggttgatgttcttggtttgggcccaaaacagataatt
gttgttgaatttgctgataaacgccgcagtttgctcgcgagtattgcacccattgtaaaa
tgcaaacaatag
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