Tropheryma whipplei Twist: TWT_087
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Entry
TWT_087 CDS
T00116
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
twh
Tropheryma whipplei Twist
Brite
KEGG Orthology (KO) [BR:
twh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twh03016
]
TWT_087 (truB)
Enzymes [BR:
twh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TWT_087 (truB)
Transfer RNA biogenesis [BR:
twh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TWT_087 (truB)
Prokaryotic type
TWT_087 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AAO44184
UniProt:
Q820Y5
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All DBs
Position
complement(96533..97666)
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AA seq
377 aa
AA seq
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MLGKVERSEMYILFAMTQVLLVDKISGITSHTAVAKIRHLTGIKKIGHCGTLDPAACGLL
IMGCGTATRLIRYMSNLDKRYIATITLGTQTTTDDSEGEIIYSAPKPSLDKITLESIGRA
AEKLSGTIKQIPSAYSAIKVSGNRAYNLARQGIIPKLNAREVRVHWKFLGDFENNQVHVQ
ITCSSGTYVRALARDMGKFLGVGGHLSYLKRLSIGPFHLHEIYREINKKEATMSERTPSG
NTQGLTDNMAISESDKHDCTEPGINCTELGIKDTCTALREVHYTQGDTLSFTRLTALQAL
SRIYKPIEVSQKQADDLSCGRYISLGIDSKGPVCAVCKENLIAVIQPVSAGLWRPETVLS
DNRKLNSNAAQDASGST
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttaggtaaagttgaacgttctgagatgtatatactgttcgctatgacgcaggttctt
ctggtagacaaaataagcggcattacaagtcacacagctgttgcaaaaataaggcacctc
acaggaataaaaaaaatcgggcattgcggaaccctcgatccggcagcgtgtggtcttttg
ataatgggatgcggaactgcaacaagacttataagatatatgtccaatcttgataagcgg
tatattgcaacaataacgctgggcacacaaacaacaactgatgattcagaaggtgagatt
atatacagtgcaccaaagccatcccttgacaaaattacactcgagagcatagggagggct
gcggagaaattaagcggaacaatcaaacaaatcccgagcgcatacagcgcaataaaggtc
tctggaaatagagcgtacaatctagcgcgtcaggggattatcccaaagctcaatgcacga
gaggtgcgggtgcattggaaatttctcggagattttgaaaataaccaagttcatgtgcag
attacctgttcatctggtacatacgttagggcattggcccgggatatgggaaaattcctg
ggtgttggcgggcacttatcatacctaaaacgcctcagcatagggccatttcatttgcat
gaaatatatcgggaaataaacaaaaaggaagccaccatgtctgagcgaacgcctagtggt
aatacgcaaggattaactgacaacatggccatctccgagagtgataagcacgattgtact
gagcctggaattaattgtactgagcttggaattaaagatacatgcacagcgcttcgtgaa
gtgcactatacacaaggtgatacactgtcattcactcgcctcacagccctccaggcatta
tcaagaatttacaaaccgatagaagttagtcaaaaacaggcagatgacctaagttgcggg
cgatatatatctcttggaatcgactcaaaaggcccggtgtgtgcagtttgtaaagaaaat
ttaattgcggttattcagccggtatcagcaggattatggcgccctgaaacagttctcagt
gataacagaaaactcaacagtaatgcggcacaagacgcaagtggaagcacataa
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