Tropheryma whipplei Twist: TWT_135
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Entry
TWT_135 CDS
T00116
Symbol
gcvB
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
twh
Tropheryma whipplei Twist
Pathway
twh00260
Glycine, serine and threonine metabolism
twh00630
Glyoxylate and dicarboxylate metabolism
twh00670
One carbon pool by folate
twh00785
Lipoic acid metabolism
twh01100
Metabolic pathways
twh01110
Biosynthesis of secondary metabolites
twh01200
Carbon metabolism
Module
twh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
twh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TWT_135 (gcvB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TWT_135 (gcvB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TWT_135 (gcvB)
00670 One carbon pool by folate
TWT_135 (gcvB)
Enzymes [BR:
twh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
TWT_135 (gcvB)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
UPF0220
Motif
Other DBs
NCBI-ProteinID:
AAO44232
UniProt:
Q83GV1
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Position
155897..158803
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AA seq
968 aa
AA seq
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MHERHIGPSQEEIDHMLGFLGYKSLDDLMNAALPNGVQSPPDIKIPSHDELTCLTQLAAY
AKMNRIKTSMLGQGFYNCITPAVIRRNILENPSWYTSYTPYQPEISQGRLEMLINFQTMI
CDLTGLEIANASMLDEASCAAEAMLLAKRVSRSSSNKYLVHNGVFPHIRRVLETRADAVG
VEIVDLPEGQSIDFDHFGVYAQYQSASGKLLDLRHLFSRSKRAGAICVIGCDLLMLTLFT
SPGELGADIAFGSAQRFGIPMNFGGPLASFLAARKAMERSLPGRLVGVSVDADSNHAYRL
TLQTREQHIRREKATSNICTATVLMAIAAVAFAQHHGPKGLRAIAHRINTVAVGFARLLK
QTAFRVSSLDIFDTIEINNPTQLCVEAESKHDLLFWKVDDNKLRITFDEVTARLDGDLPE
RLSKVFGISPDKIRDLGCNYDSCDCSFYSDSQQAREGLSSVASRNISVHSDLARHPLRRF
SGYLKHPVFNNYTGEVALMRYLKALSDKDFALDRGMIPLGSCTMKLNAAFQLEPVLWPEF
ANLHPFAPRGDADGTLQIIDQIETWLANLSGYDAVSLQPTAGSQGELAGLLAIRGYYKSL
NLDRDVCLIPASAHGTNAASAVLAGMRVVVVACDQQGNIDLDDLRLKASKNAHALAALMV
TYPSTHGVYEDNISEVCSVVHKYGGQVYVDGANSNALIGYLRTGDFGGDVSHLNLHKTFG
IPHGGGGPGIGPVVAKAHLAPFLPFRNRVHKPSTDLPAVKHMGGPIASSDYGFAGALYIS
WAYIFCLGSQGMKRCTAVAVLVANYIAKQLSDTFPVLYTGKNNLVAHEFIMDFREVTRVS
GITVDDVCKRLIDYGFHAPTMSFPVPGTLMVEPTESEPFSEIQRFIKTIRSIRAEIDRVI
DKTYDPDNNPLKRAPHTLEQIASDKWDRPYSRRTGIVYTSGKYWPASARIDNAYGDRNIF
CTCPDLPD
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagaggcatatcggcccaagccaagaagagattgatcacatgcttggctttctt
ggttataagagccttgatgatctcatgaatgctgcgcttccaaacggcgtacagtcgcca
ccagatatcaagatcccgtcacacgatgagctaacctgcctcacccagctagcagcgtac
gcgaagatgaatcggataaagacctcgatgcttggccaggggttctataactgtattact
cccgcagttatacgcagaaatatccttgaaaatccgtcttggtacacctcttacacgccg
tatcaacctgagatttctcagggtcgccttgagatgctgatcaattttcaaaccatgatt
tgcgatctaaccggcctggaaatagctaatgcatcaatgttagatgaggcgtcatgcgcc
gcagaggcgatgcttctggcaaaaagagtctctagatctagttccaataagtatctcgtt
cataacggcgtatttccccatatccgaagggttcttgaaactcgtgctgatgctgttggc
gtggaaattgtggatctgcccgagggtcaatcaatagattttgaccatttcggtgtttat
gcacaataccagtcggcttctggtaagttgcttgatttgcggcacctgttttctaggtcg
aaacgtgcaggcgcaatttgtgttatcgggtgtgacctgctgatgcttacacttttcaca
agtcccggtgagcttggtgcagacatagcatttggctcagctcagcgctttggtattccg
atgaatttcggtggacccttggcatctttccttgcggcccgtaaagcaatggaacgctct
cttccgggtcggcttgttggtgttagcgttgatgctgactcgaaccatgcctacagactg
actttacagacaagagagcaacatattcgccgcgagaaggcaacatcgaatatttgtacg
gcaaccgttctaatggcaattgccgctgtggcttttgcgcaacatcatggcccaaagggt
ttgcgtgcaatagctcataggataaacacggttgctgtgggttttgcccgcctcttgaag
caaacggctttcagggtgtcatccttggatatattcgacactatcgaaataaacaatcca
acacagctttgcgtcgaggctgaatcaaaacacgatctcttgttctggaaagtcgatgat
aataaactcaggattacctttgatgaggtaacagctagactggacggagatttgccagag
agactgtcaaaagtcttcggcatatcccccgacaagattagagatcttgggtgtaattac
gattcatgtgattgttctttttatagcgattcgcagcaggcccgcgaaggcttgagttca
gttgcatcgcgcaatatttctgttcattcagatctcgcccggcatccactcaggcgcttt
tcaggttatctaaaacatcctgttttcaataactacactggcgaggttgctctaatgcgg
tatttgaaggctttgtccgataaagactttgcccttgacaggggaatgataccgctcggg
tcgtgcactatgaagctaaatgcggcgttccaattagaaccggtattatggccagaattt
gcaaatctacatcccttcgcacctcgaggagatgctgacgggacactgcaaataatcgat
caaatagaaacgtggcttgcaaatttaagtggatatgatgctgtatctttacaacccacc
gccggcagtcaaggcgaactcgctgggctgttggccattcgcggctactacaagtcttta
aaccttgatcgggatgtctgcctaattcctgcaagcgcacatggtaccaacgcggccagt
gcggttctcgctggcatgcgcgttgttgtggttgcctgcgatcaacagggcaatatagat
cttgatgatctaaggcttaaggcgtcaaaaaacgcacatgcgcttgcagctctcatggta
acttacccctcaacacatggggtctatgaggacaatatttccgaggtatgctctgtggtt
cacaaatacggaggacaggtttatgttgacggtgcaaattccaatgccctgatcggatat
ctgaggacgggtgattttggcggtgatgtgtcacatctgaatcttcacaagacatttggc
attccccacggcgggggtggtccaggaattggccccgtcgttgccaaagcacacttggct
ccctttttacccttcaggaaccgagtgcataaaccatctactgacttacctgctgtgaaa
catatgggtgggcccattgcgtcgagtgattacggctttgccggcgctttgtatatcagc
tgggcctatatattttgcctcggctcgcagggaatgaagcgttgcactgctgttgccgtt
ttggttgctaattacatcgcaaaacagctttccgatacatttccggttttatatacaggg
aaaaataatcttgttgcgcatgagttcattatggactttagggaagtaacaagggtaagc
ggaattacggttgatgatgtgtgtaaacgacttatcgattacggttttcatgccccgaca
atgtcttttccggttcctggaaccttaatggttgagccaacagaatctgagccattttct
gaaattcagcggttcataaaaactatccgttcaattcgggctgaaatcgaccgggtaata
gacaagacgtatgatccagataataaccccctgaagcgcgccccacacactctggagcag
attgcatcggataaatgggataggccatattcacggcgtacaggcattgtttatacctcg
ggaaagtactggcccgcatctgcgcggattgataatgcatatggtgatagaaatatcttt
tgcacatgccctgatttgccggattaa
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