Tropheryma whipplei Twist: TWT_519
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Entry
TWT_519 CDS
T00116
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
twh
Tropheryma whipplei Twist
Pathway
twh03420
Nucleotide excision repair
twh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TWT_519
03430 Mismatch repair
TWT_519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twh03400
]
TWT_519
Enzymes [BR:
twh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TWT_519
DNA repair and recombination proteins [BR:
twh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TWT_519
MMR (mismatch excision repair)
Other MMR factors
TWT_519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
PhoH
DEAD
Motif
Other DBs
NCBI-ProteinID:
AAO44616
UniProt:
Q83G17
LinkDB
All DBs
Position
complement(622277..625198)
Genome browser
AA seq
973 aa
AA seq
DB search
MNMSLRDSRHMCSILNLHAPTEEQRAIIESPLENALVIAGAGSGKTETLVLRLLWLIASG
KLKPESIMGLTFTRKAAGELASRLQKSLAILNSYTGDVLSPEIDVLTYNSFANSIYQDNA
LLLDHPVPYTAIEDSEAQLIARRLLVEHGLDEDEPSETIDNLASSLIKLDDAIVDNLLDL
GELNQFASEFIEFVGAFDAPVAKSDVFRAKRLIALSKLIPALKDEKKLRGRISYSEQVAF
ALEVCRQTHVLAEFQEKIAYVVLDEYQDTSPIQVEFLKTIFGNRCRVLAVGDPRQAIFGF
RGASVANIANFARDFVSNKQYELSISWRNDKNILDLANHISPKIRPLHPRPEANDGSTSL
EVYTDPEQEVHEGALWLNSVVEKGTAAVLTRTRSRLISVSRVLDEIGVSYTRADVNIFYE
PEVVDILSCMRIISGVNENLSFLRLITGPRWQVGISDLHALRGYIAVGKKNLDRISLLEA
VNRINIQKTPMSCEGKKRLEDFLEFFRKIKGLSFLSPLELAYLIEESLNLDIEVQMSHRG
RENLDALYELIASFRGDNLSEMLAWFDSLEEEDAFRGPTKQSCPGQVELFTVHSAKGLEW
DWVLLPFLDDFPAKSREKSGWLSKTGLLPFCLRLDRESLPEFYFHKCSDSKEYRAARRQY
EDDVLQHQIREERKLLYVAVTRARQGLRISASARQKPGQFLREISEFLQTDLPQAVHNNP
KKRVGYWPLDSLGARRKRVKLAAAAVHNRSIEESEESLKKEPLKALIAGMLKELDISVDK
PEKRISATALSKKDPNVFLLPQPPIKNAWLGVAFHAWIENYYSTYSDMLFHENSADEYGI
SGPVFEQSQRFSPELDQLRHNFMQSEWSYKKPIAVELSLEWLIGDVIVPCTIDAVFFDGD
RYTILDWKSGLSSNQYRIQLSLYRLAFAEWKGVNPDKVEAKIYFAADNRTIKVRPYTVDE
LGKMPGFLSDLFS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtccctcagagacagtcgtcatatgtgcagtattctcaatctgcatgcgccg
actgaagaacagagggcaattattgaatctccactggaaaatgctcttgttattgccggc
gcaggaagtggtaaaactgaaactcttgttcttagactcttgtggcttattgcatccggc
aagctcaaacccgagtctattatgggcttaacatttaccagaaaagccgcgggcgagttg
gcatcccgcctgcagaaatcccttgcaatactcaattcttatactggtgatgtattgagt
ccagagattgatgttcttacctacaattcatttgccaattccatatatcaagataacgcc
ctgttgcttgaccatccggttccctatacagcaattgaggattctgaagcccaactaatc
gcgcgcagacttcttgtggaacatggccttgacgaggacgagccgtcagagacaattgac
aacttggcgtcaagtctcataaaacttgatgatgccatagtggacaatctactcgatttg
ggtgaattaaatcagtttgcctcagaatttatcgagtttgtaggtgcttttgatgcaccc
gttgcgaagtcagacgtattcagggccaagaggttaattgcactttcaaaacttattcca
gctttgaaagatgaaaaaaaacttcgcggcagaatcagctattccgagcaggttgcattc
gcactggaggtttgtcgccagactcatgttttggcggagtttcaggagaaaatagcttac
gttgtattagatgaatatcaggatacatcacccatccaggttgagtttctgaaaactatt
ttcggcaatagatgtcgtgttcttgcagtcggcgatccaaggcaggcaatttttggtttc
agaggcgcaagcgtggctaatattgcaaactttgcacgtgattttgtttccaacaaacag
tacgaattgtctattagttggcgaaatgacaaaaatattttggatttagcaaaccacatt
tctccgaaaataagacctttgcacccaagaccagaagcaaatgatgggtcaacttcgctt
gaggtttacactgatcccgagcaagaggtgcatgaaggcgccctgtggctcaattcggtt
gtagaaaaaggtacggctgcggttcttacacgaactagatcacgtttgatttctgtaagc
cgtgttttggacgagatcggtgtttcgtacactcgtgctgatgtgaatatattttacgag
cccgaagttgttgacatcttgtcatgtatgcgaataataagcggcgtaaatgaaaatctt
tctttcttgcgtctcattacaggtccgcgttggcaggtaggaataagtgatctacacgcc
ctgcggggttatattgcggtcggtaaaaaaaacctggacagaatatcccttttggaggcg
gtaaatcgtataaatatacaaaaaacacctatgtcttgtgagggaaagaagcgcctggaa
gattttttggaattttttcgcaaaataaaaggtctttcatttttatcaccccttgagttg
gcatacctaattgaggagtccctgaaccttgatatagaggttcaaatgtcccaccgtggt
cgcgaaaacctagatgcactatacgaactgattgcgtcctttaggggagataacttaagc
gaaatgcttgcgtggttcgattcccttgaagaagaagatgccttcagaggccccacaaaa
caatcctgccccggacaagtcgaattattcacagttcatagcgcaaagggccttgagtgg
gattgggttttgcttccatttttggacgactttcccgcgaagagcagagagaagagtgga
tggcttagcaagacaggcttattaccattttgccttcgtctcgacagagagagcctcccc
gagttctattttcacaaatgctctgattcaaaggaatacagagctgctcgccgacaatat
gaggatgatgttctgcagcatcagatcagggaagaaaggaagttactctatgttgctgta
acccgtgcacgacagggcctgcgaatctccgcttctgctagacaaaaacccggtcaattt
ctacgggagatttctgaatttctgcaaacagatctaccacaagctgttcataataacccg
aaaaagcgtgttggttattggccccttgattcacttggcgcgcgtagaaaacgggttaaa
ctcgccgctgcagccgtacacaatagatctattgaagaaagtgaagaatcgctcaagaaa
gagccattaaaggctttgatagctggaatgctaaaggaattggatataagcgtagataaa
ccggaaaagaggatttccgcaacagcgctttccaaaaaagatcctaatgtttttttgtta
ccacaaccgcctataaaaaatgcatggcttggagttgcatttcatgcatggatagaaaat
tattactcaacatattcggatatgttattccacgagaacagtgccgacgaatacggcatc
tcgggccctgtctttgagcaatctcaacgattttccccagagcttgaccaattacgacat
aactttatgcagtccgaatggtcttataaaaagcccattgcggttgagcttagccttgaa
tggcttattggtgatgttattgtgccgtgcacaatcgacgctgttttttttgatggcgat
agatatacaattctggattggaagtcgggactatcatctaatcagtatcgcattcagctt
tcgttgtatcggcttgcctttgctgaatggaaaggtgtcaaccctgacaaagtggaagca
aaaatatattttgcggccgataatagaaccatcaaggttaggccatacactgttgatgag
cttggtaagatgccgggatttctgtctgaccttttctcatag
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