Thermoanaerobacter wiegelii: Thewi_0558
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Entry
Thewi_0558 CDS
T01607
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
twi
Thermoanaerobacter wiegelii
Pathway
twi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thewi_0558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twi03400
]
Thewi_0558
Enzymes [BR:
twi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Thewi_0558
DNA repair and recombination proteins [BR:
twi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thewi_0558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PIF1
DEAD
SLFN-g3_helicase
Helicase_RecD
PhoH
nSTAND3
AAA_22
MeaB
AAA_24
SRP54
DNA_pol_lambd_f
AAA_28
KAP_NTPase
ABC_tran
NPHP3_N
UvrD-helicase
RsgA_GTPase
HHH
AAA_23
ATPase_2
AAA_16
AAA_12
UvrD_C
cobW
NTPase_1
AAA
T2SSE
AAA_29
TrwB_AAD_bind
MobB
CbiA
TraI_hel_assoc_N
HHH_2
KTI12
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEM78017
UniProt:
G2MQW8
LinkDB
All DBs
Position
579436..581643
Genome browser
AA seq
735 aa
AA seq
DB search
MIDIEGVVEEIIFRNEQNGYTVLELSTQDLVVTAVGYMPYVNIGERIKIEGEWVEHPDYG
EQIRVLNYETLAPTTLEGIEKFLSSGLIPGIGPVTARKIVKKFGVDSLNIIETAPERLKE
IKGLSDEKIKRICEAYEMQKGIKEVMVFLQGYGISTAMAIKIYKEYGNNAIEIIKQNPYR
LADDIFGIGFKTADKIAESLGVDPHSLYRISSGTRYVLMQYAANGHTYVPKELLKKEAAS
LLEVSEEEVEDSFVLLVQNEKIHIETFEDNTVGIYYIPYYIAELHTAERLFNMTLMENED
LGLDVQKEIRNFEKETGILLAENQKLAVEEAVKNSVVVITGGPGTGKTTIINCIIRIFEK
AGKKVALAAPTGRAAKRITEATGKEAKTIHRLLEYTYSEEEGKGFNKNEKDPLKYDVIIV
DEASMVDILLMNALLKAIPIGAKLILVGDADQLPSVGAGNVLRDIIDSGIVKVIRLKEIF
RQQKQSLIVVNAHKINNGEYPAYNDKNSDFFFINANTQEDILKTILELVTNRLPKAYGFH
PINDIQVLTPMRKGIIGVHNLNLELQKTLNPHDKTKAEKIMKEFVFRVGDKVMQIKNNYK
IKWKKGDEEGEGVFNGDIGIIQSIDEELQELTVYFDDEKFVTYDFSDLDELNLSYAITVH
KSQGSEFPVVIMPITYGPPMLLTRNLLYTAVTRAKKLVILVGQEKYLKFMIDNNRISKRY
SGLLSRLKKALLYVN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgattgacatagagggtgtagttgaagaaataatttttagaaatgaacaaaatggttat
acggttttagaattaagtacccaagatttagtagtcactgctgtaggttatatgccttat
gtaaacattggggaaagaattaaaattgaaggagaatgggtagaacatcctgattatggt
gagcaaattagggttttaaattatgaaaccttggctcccaccactttagaaggaatagaa
aagtttttatcttctggcttaattcctggaataggtcctgttacagcaagaaaaattgta
aaaaagtttggcgttgattctttaaatataattgaaactgcaccagaaagattaaaagaa
ataaaaggtctaagcgatgagaagataaaaagaatttgtgaagcttatgaaatgcaaaag
ggcataaaagaagtgatggtgtttttgcaggggtacggtatttccactgcaatggctata
aagatttataaagaatacggaaacaacgcgattgaaattattaagcaaaacccttacaga
ttggctgacgatatatttggaataggatttaaaactgcagacaaaatagcagagagccta
ggagttgaccctcattctctatatcgcatatcttctggtactcgatatgttttgatgcag
tatgcggcaaatggtcacacctatgtgccgaaagaattgttaaaaaaagaagcagcaagt
ttgttagaagtaagcgaagaagaagtagaagattcttttgtgcttttagtacaaaatgaa
aaaatacatattgaaacttttgaagataatactgtaggaatctactatataccttattat
atagctgaattacacacagcagagagattgtttaacatgacactaatggaaaatgaagat
ttaggtttagatgtccaaaaagaaattagaaattttgaaaaagaaacaggtattttgttg
gcagaaaatcaaaaattggctgtagaagaagctgttaaaaattctgttgttgtcataacg
ggaggtccaggcacaggaaagactacgataataaattgtataatacgtatttttgaaaaa
gctggtaaaaaagtggctcttgcagccccaacaggaagagccgcaaaaaggataacagaa
gctactggaaaagaggcaaaaactattcataggcttttagagtatacttattcggaagaa
gaagggaagggatttaacaaaaatgaaaaagacccattaaagtacgacgttataatagtt
gacgaagcttcaatggtagatatattgcttatgaatgctctattaaaagccatacctata
ggagcaaagctgattttagtaggggatgctgaccaacttccatctgttggagcgggaaat
gtcctaagagatataatagacagtggcatagtaaaagtgatacgattaaaagaaattttt
agacaacaaaagcaaagcttgatagtggtaaatgctcacaagataaataatggagaatat
cccgcctataacgataaaaatagtgatttcttttttataaatgccaacacacaagaggat
atattaaaaaccatattggaacttgtgacaaacagacttcctaaagcttatggatttcat
cctattaatgatattcaagtactcacccctatgagaaaggggataattggtgttcacaat
ttaaatttagaactgcaaaaaacattaaatccccacgacaaaactaaagccgaaaaaata
atgaaggagtttgtcttcagggtaggggataaagtgatgcaaataaaaaataattacaag
ataaaatggaaaaaaggcgatgaagaaggagaaggagtgtttaacggagatataggaata
atccaatcaatagacgaagaattacaggaattgactgtatattttgacgatgaaaaattt
gtcacttatgacttttctgatttggatgaactaaatttgtcttatgctataacagtgcac
aaaagccaaggcagtgaatttcctgttgtcataatgccaattacttatgggcctcctatg
ctacttacaagaaaccttttgtacaccgccgttacaagggcaaagaaattggttattttg
gtgggtcaagagaaatatttgaaatttatgattgacaacaatagaatctcaaaaagatat
tcagggcttctttcaaggcttaaaaaagcacttttgtatgtaaattaa
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