Tripterygium wilfordii (thunder duke vine): 119980062
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Entry
119980062 CDS
T07256
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119980062
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119980062
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119980062
NCBI-ProteinID:
XP_038678646
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Position
15:11313302..11315022
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AA seq
442 aa
AA seq
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MELAKLIRLIFFFSFATLIPTLLADIAEFDEVWKERADEAKKNALEAYQPDPESVTFDFN
FEVNKETDSFSNSTTRRNLMHIRKYKGPCRATNPIDRCWRCKKKWANNRKRLAKCVLGFG
RKTTGGLRGRYYLVTDSSDDDVMEPKPGTLRHAVIQKQPLWIIFARSMIIKLSKELIITS
DKTIDGRGANVQIAYGAGLTIQFVKNVIIHNLKIHHIVQREGGMIRDSVDHIGLRTFSDG
DGISIFGSSNVWIDHVSMSKCQDGLIDAIVGSTAITISNSHFTHHNDVILLGASDAYEDD
KIMQVTIAFNHFGQGLIQRMPRCRWGFFHVVNNDYTHWRMYAIGGSKHPTIISQGNRFIA
PDEAHLKEVTHRDYAPESEWKQWTWRSEGDVLMNGAVFVQSGAPLKKKPYSRLDMIKAKP
GTFVTRLTRFSGTLKCKVGKRC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagttagctaagctgatcagattgatttttttcttctcctttgccactctcattcca
accctgttggctgacatcgctgagttcgatgaggtttggaaggaaagagctgacgaggct
aagaagaacgcgctcgaggcctatcaacctgacccggaatcagtcacctttgacttcaat
tttgaagttaacaaggaaacggattcgttttccaacagtactactagaagaaaccttatg
catataaggaaatacaaaggaccatgcagggcaaccaatccaattgacaggtgctggagg
tgcaagaagaaatgggcgaataaccgcaagaggctagccaagtgtgtgcttggttttggc
cgcaaaaccactggaggcttgcgtggtaggtactatttagtaaccgatagctcagacgac
gatgtcatggaaccgaaaccaggaactttacgccacgctgtgatccagaagcagccattg
tggatcatatttgcgcgtagcatgatcatcaagttgtccaaggaattgatcatcacaagc
gataagaccattgatggtcgtggagctaatgttcagattgcttatggggctggtcttacc
attcaatttgtcaagaatgtgattattcataaccttaagatacatcatattgttcagaga
gaaggtggcatgattagggactctgtagaccatatagggctccgaacattcagcgacgga
gatgggatttcgatctttggttcaagcaatgtttggattgaccatgtttccatgtcaaaa
tgtcaggatggactcattgatgcaatcgtcggatccactgccatcaccatttcaaacagc
cacttcactcatcataatgatgttatcttgttgggtgcaagtgatgcatatgaagatgat
aaaataatgcaagtcacaattgcattcaaccattttggtcagggactaatacagagaatg
ccaagatgtagatggggtttcttccatgttgtgaacaatgactacactcactggagaatg
tatgccattggtggcagcaaacatccaaccattatcagccagggcaaccgattcatcgct
cccgacgaggcccacctcaaagaggtgacccatagggactatgccccagagtctgagtgg
aagcaatggacatggagatcagaaggagatgtattgatgaatggagccgtgtttgttcaa
tccggtgctccactgaagaagaaaccatacagtagactggatatgatcaaagcaaagcct
ggaacatttgttacaaggctcacacgcttctctggcacactcaagtgcaaggttggaaag
agatgttaa
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