Tripterygium wilfordii (thunder duke vine): 119980320
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Entry
119980320 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
119980320
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119980320
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Helicases
119980320
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
119980320
NCBI-ProteinID:
XP_038678942
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All DBs
Position
1:complement(7220467..7227733)
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AA seq
586 aa
AA seq
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MVENRALTSTRFSDLNPSLSEPVLNALTEAGFEYCTPVQAATIPLLCSFKDVAVDAATGS
GKTLAFVVPLVEIFRRATGPTKPHEVMGVIISPTRELSSQIFHVMQPFISTLPSVKSILL
VGGGDVKADLKKIEDGANLLIGTPGRIFDIMERVDALDFKNLEVLILDEADRLLDMGFQK
QVNYIISRLPKLRRTGLFSATQTEAVAELSKAGLRNPVRIEVQAETKFINDSASSQQLSS
SKTPSGLHLEYLECEADKKSSQLVDYMIKNKSKKIIVYFMTCACVDYWGVVLPCLSVLKG
FSLIPLHGKMKQSAREKALASFTTLSSGVLLCTDVAARGLDIPGVDCIVQYDPPQDPNVF
IHRVGRTARLGRQGSAIVYLLPKEEAYVEFLRIRRVPLQERNLVDDASDVVPQIRSAAKK
DRDVMEKGLRAFVSFIRAYKEHHCSYIFRWKELEIGKLAMDYGLLQLPSMSEVKLHSLST
EGFTPVEDINLGDIKFKDKSREKQRKKNLQAKKEAQQQAPKPLKPNKPATVGPSAMRKKT
AKQRRAAQTIEDADELTRDYRLLKKLKRGAIDETEYAKLTETEDLL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaaacagagccttaacaagcacgcggttctccgacctcaatccgtcactctcg
gaaccggtcctcaacgccctaacagaggctgggttcgagtactgcacaccagtgcaggcc
gccacgattcccttgctatgtagtttcaaggatgtcgccgtcgacgctgctactgggtcg
ggcaaaaccctcgcttttgttgtccctctcgttgagatattccgtcgcgccacagggcct
accaaacctcacgaggtgatgggtgtaattatatctcctacaagggagctgtcatcgcag
atatttcatgtgatgcaacctttcatatcgacattgccgagtgttaagtccatccttctt
gttggtggtggagatgtaaaagcagatttgaagaaaattgaggacggtgcaaatttgctg
attggcacccctggaagaatatttgacataatggaacgcgtggatgctttggattttaaa
aacctcgaggttttgattttagatgaggctgataggttgttggatatgggattccagaag
caggtaaattatattatctctcgattgccaaagcttcgaagaactggtcttttctcagca
actcaaactgaggctgttgcagagctatccaaagcaggattgaggaatcctgtgaggatt
gaagttcaagcagaaacaaaattcattaatgattcagcatcatcgcaacaattgtcatct
tccaaaacaccttcaggccttcaccttgagtatttggaatgcgaagcggataagaaatca
tcacagcttgtagattacatgatcaagaacaaatctaaaaaaattatagtatacttcatg
acttgtgcttgtgttgattactggggagtggttcttccatgtctttctgttcttaagggc
ttctccttgatccctctccatgggaagatgaagcagagtgccagggagaaagcactggct
tcctttacgactctttcaagtggtgttcttctgtgtactgatgtggcagcacgtggactt
gacattcctggtgttgactgtatagttcagtacgatccgccacaagatccaaatgttttc
attcacagagttggtcggactgctcgtttaggaagacaaggcagtgctatagtttattta
ttgccaaaggaggaagcttatgttgaatttcttcgcataagaagggttcctcttcaagag
aggaatcttgttgatgatgcttctgatgttgttccacagatacgatctgctgcaaagaag
gatcgtgatgtcatggagaaaggactcagggcatttgtttcatttattcgagcatataaa
gaacatcactgctcttacatctttagatggaaggaacttgaaatagggaaactggcgatg
gactatggcctattgcaactcccatcaatgtctgaggtaaagcttcattcactttccact
gagggtttcactccagttgaagacatcaatttgggggacatcaagttcaaggataaatct
cgtgagaaacaacggaaaaagaatttgcaagccaagaaagaagcgcaacagcaagcgcca
aaacccctgaagcccaacaagcctgcaactgttggacccagtgccatgagaaagaagaca
gctaaacagagacgtgctgcccagacaattgaagatgcagatgagcttactcgggactat
cgccttctgaaaaaattgaaaaggggggctattgatgaaacagaatatgcaaagttaact
gaaactgaagatttactttga
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