KEGG   Tripterygium wilfordii (thunder duke vine): 119980482
Entry
119980482         CDS       T07256                                 
Name
(RefSeq) uncharacterized protein LOC119980482
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119980482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:twl03036]
    119980482
   03400 DNA repair and recombination proteins [BR:twl03400]
    119980482
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    119980482
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     119980482
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 119980482
NCBI-ProteinID: XP_038679115
LinkDB
Position
16:10784491..10788537
AA seq 551 aa
MCERKVSQPALERAQADSLEMKPVRMRKWESQKQGSQKPVHGLSMDSEPKKTKRGSTSKV
QKVVSPYFPLPIPEKDEEIVVLKKRGRTRKVQKVVSPYFPIPIPEKDEEIVVLKKRGRAR
KVQRVVSPYFPIPIPEKGEEIVVLEKRGRTRKVQRVVSPYFPIPIPEKDEEIVVLEKRET
NGRSARGGKSPKVEVTSTTDLESNANSLFVDNESVGSRSNLMVGVSNGKKGRKRDEGEGE
LDCSNRSRVTKRKWNDPLCSQQDLNSGVKEEKRDEKVPHFVISSGTRGENGSERATSFGK
TSFEDLLSQFEYKGNGMTRNIGKLRACSSHFQKGVKKEEGNSNCKGDRIASVKEFNYSQE
STACIRKMRQGNAGCKKLPRMHKTPGFVKTTLSASQKKDEAYLRKTSDNTWRPPRSEFGL
LQEDHVHDPWRVLLICILLNRTSGKQVREAIPGLFALCPNAKAATEVGTAEIERVIEKLG
LQKKRSVMIQRFSREYMEEGWTHVTQLHGVNKYAADAHAIFCTGKWDRVTPCDYMLDYYW
KFLRSIKDALP
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgtgcgagaggaaagtttctcagcctgcgctggaacgagcacaagcggattctttagag
atgaagccggtgaggatgaggaaatgggaatctcaaaaacagggtagccagaaacccgtt
cacggtttgtccatggacagtgaaccgaagaagacgaagagggggagcacgagcaaggtg
cagaaggtggtatctccctattttccgctaccgattcctgaaaaagacgaggaaatcgtg
gtcctcaagaagagggggcggacgaggaaggtacagaaggtggtatctccctattttcct
ataccgattcctgagaaagacgaggaaatcgtggtcctcaagaagagggggagggcgagg
aaggtgcagagggtggtatctccctattttccgataccgattcctgagaaaggcgaggaa
atcgtggtcctcgaaaagagggggaggacgaggaaggtgcagagggtggtatctccctat
tttccgataccgattcctgagaaagacgaggaaatcgtggtcctcgagaagagggagacg
aatggaaggagcgcacgtggtgggaagagcccaaaagttgaggtaacttctaccacggat
cttgaatcaaatgccaattcgctgtttgtagacaatgagagtgtgggttctaggagtaat
ttgatggtaggcgtttccaatggaaagaaagggcggaaaagagacgagggtgagggagag
cttgattgcagtaatcgcagtcgggtcacgaagaggaagtggaacgaccctctatgttcc
cagcaggatttgaattctggggtgaaggaggaaaagagggatgaaaaagtgccacatttt
gtgattagtagtggtactaggggtgaaaatggcagtgaaagagctacctcatttggaaag
acaagcttcgaggatttactatcgcaattcgaatataaaggcaatggcatgacaaggaat
attggaaaactgcgagcatgcagttctcatttccagaagggtgtgaaaaaggaagaggga
aacagcaattgcaagggagatagaatagcatctgttaaagagttcaactattcacaagag
agcactgcatgcattcgaaagatgaggcaggggaatgctggatgcaaaaagttgcctaga
atgcataaaacgccagggtttgttaagactactctttctgcctcccagaagaaagatgag
gcatatctacgaaaaacttctgacaacacctggagacctccccgttctgaatttggactc
ctccaggaggatcatgtgcatgacccttggagggtgttgttgatatgtattcttcttaat
cgtacttctggtaaacaggttcgagaagctataccaggcctcttcgctttgtgtcccaac
gctaaggctgcaactgaggttgggacagcagaaatagaaagagtgatagagaaactaggt
ctgcagaagaagaggtcggttatgatacagcgtttttctcgggagtatatggaggaagga
tggactcatgtgactcagcttcatggagttaacaagtatgctgctgatgcacatgcgatc
ttctgtacaggaaagtgggatcgggttacaccttgcgattatatgcttgattattattgg
aaatttcttcgtagcatcaaggatgctctgccatag

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