Tripterygium wilfordii (thunder duke vine): 119980551
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Entry
119980551 CDS
T07256
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119980551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119980551
03036 Chromosome and associated proteins [BR:
twl03036
]
119980551
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119980551
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119980551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
119980551
NCBI-ProteinID:
XP_038679218
LinkDB
All DBs
Position
16:9433328..9441581
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AA seq
1089 aa
AA seq
DB search
MFGSNTPFGQSSTSPFGTQSVFGQNSGASNNPFAPKPFGSTTPFGSQTGSSIFGGTSTGV
FGPTQSSSPFSSTTAFGASSSPFSTPAFGASSTPAFGSSSASFGGSSVFGQKPAFGGFGS
AAQTTPFGSATQQSQPTFGSSVFGSSSPFGASSQGAFGATSSPGFGTTSTPAFGAASTPA
FGATSTPAFGATSTPAFGSTSTPAFGSTGSAFGVSNSPMFGSGGAFGASSSPAFGSPGTP
AFGASGTPAFGAPGAPAFGASSTPAFGASGTPAFGASGTPAFGAPGTPAFGASGTPAFGA
SGTPAFGASSTPAFGASSTPSFSFGSSPAFGQSASAFGSSPFGTATAPYGAQSSPFGTQA
TTSAFGSSTFVQSAGGTPRVGSRVAPYTPTTETDSSGTQPAGKLESISAMPVYKDKSHEE
LRWEDYQVGDKGGPLPAGQPAAGVGFGALAPQSSPFASSSTFGQTSANPFSSSTSSNLFA
SKPPGFGGQGFGSSSTPAFGSSPFGPSSSPNPFSTTSSVFGTTATSVFGSGPSPSVFGSS
SSSTFGSSPSIFGSTSQTPSIFGSTSQATTPGFGSSINFGNTQTSPLFPSITPSLGQTGS
AFGQSTTPSFGQSTAPSFGQQGGFGSSGFGGSFFASAPSMIPSSSPMGFGQTTPSISTPF
QPAQPAPTAGAFGFSNFGQTRAANASGFGGTSNLFGQSNLGQFSATQGSTVMQPAPITNP
FGTLPAMPQMSIGQAGAAPSVRYGISTMPVVEKPAPVRISSLLTSRHLSQRRIRWPARKY
QSKNDGPKVPFFDDDEETASTPKADAFLIPRENPRALVIRPIDQWPSRSNAEKASPLKDR
STPVHENGKTSGEANIPADGDNNPVEDGIVKEQVYRTVNQKPNGVHDDHSVQKEDAYTTL
SGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAKPGFCRHVKDFAVGR
HGYGSIKFLGETDVRRLDLEALIQFNNREVIVYMDESKKPPVGQGLNKPAEITLLNIKCF
EKKTGQQYIEGPKIEKYKEMLRRKAEDQGAEFVSYDAKKGEWKFRVNHFSTYKLDDDGDD
WCTQTTSVC
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcgaataccccttttgggcagtcatctactagcccattcgggacgcagtcc
gtctttgggcaaaacagtggtgcgagtaataatccttttgctcccaaaccttttggcagc
acaacaccatttggttcacaaacaggtagttccatttttgggggcacttcaactggtgtg
tttgggcctacccaatcttcttcacccttctcttcgacaacggcatttggtgcttcatct
tctcccttttcaacacctgcttttggagcttcttctaccccggcttttggtagttcatcg
gcatcctttggtggatcttctgtttttggtcagaagcctgcttttggtggttttggctct
gctgctcaaacaactccttttggaagcgcaacccagcagtctcagcctacatttggcagt
agtgtatttggttcttcctcaccctttggtgcatcaagtcagggtgcttttggtgccacg
agctcccctggatttggtaccacgagcacccctgcttttggtgcagctagcacccctgcc
tttggcgccactagcactccggcatttggtgccactagcactccggcctttggttcaaca
tcaactccagcatttggcagcactggttctgcatttggtgtgtcaaattctccaatgttc
ggatctgggggagcatttggtgcttcaagctctcctgcatttggttctccgggaactcct
gcatttggtgcttcaggaacccctgcttttggggctccgggcgcacctgcttttggggcc
tcaagcacccccgcttttggggcgtcgggaacccctgcttttggggcctcgggcactccc
gcttttggggcccctggcactcccgcttttggagcctcgggcactcccgcttttggggcc
tcgggcactcccgcttttggggcttcaagcactcccgcttttggggcttcaagtacccca
tccttcagctttgggtcctcccctgcatttgggcaatcagcttcggcatttggtagtagc
ccctttggaactgctactgctccttatggagctcagagttccccgtttggaacacaggct
acaacatcagcatttgggagcagtacctttgtgcagtctgccggtggaactccacgcgtg
ggaagcagggtagccccttatacgccaacaactgagacagacagtagtggtacacagcct
gctgggaagttggagtcgatatcagccatgcctgtctacaaagataaaagccatgaggag
ttgagatgggaagactatcaagtgggagataaaggtggaccactccctgctggtcaacct
gctgctggggttggctttggtgctctggctccacagtccagtccttttgcttcatcatca
acatttggtcaaacatctgcaaatccattttctagctcgacttcctccaacttatttgct
tcaaaacctcctggttttggtggtcaaggctttggaagctcatccactcctgcattcggt
tcttcaccttttggtccttcttcttctcccaaccctttttcaacaacctcatctgtattt
gggacaacagcaacatccgtatttgggtctggtccatctccatcagtttttggatcatca
agctcatcgacatttgggtcatccccttccatctttggttctacatctcagacaccatca
atatttggttctacatctcaggcgacaaccccagggttcggctccagcattaatttcggt
aacactcagacatctcccctattcccgtccatcacaccttcacttggacagacggggtcg
gcttttggacagagtactaccccttcctttggacagagtactgccccttcctttggtcag
cagggtggattcggttctagtggttttgggggaagctttttcgcaagcgctccatcaatg
attccttcaagcagcccaatgggttttggccaaacaactccttctatttcaacgcctttt
caaccagctcagcctgcaccgactgctggtgcttttggcttcagcaactttggccagaca
cgagcagctaatgcaagtggatttggtggcacatcaaacctttttggtcagagtaatttg
ggacagttttctgccacacaaggctcaactgtcatgcaaccggcacccattactaatcca
tttggaacacttcctgccatgccccaaatgtcaattggtcaagctggagctgccccttcc
gttcgatatggaatttcaaccatgcctgtagttgaaaagcctgctcctgtgagaatatca
tccttattgacttctcgacacctttcacaaaggcggattaggtggcctgcaaggaaatat
cagtctaagaatgatggtccaaaggttccatttttcgatgatgatgaagaaacagcaagc
acgccaaaggcagatgcttttctcattcccagggaaaatccaagagcgttggttattcgt
cccatagaccagtggccttcgaggtctaatgcggagaaagcttctcccttgaaggatagg
tctaccccagtgcatgaaaatggcaaaacttctggagaggcaaatattcctgctgatgga
gacaacaatccagttgaagatggcattgtgaaggagcaagtttatcgtacagtcaaccag
aaacctaatggagtccatgatgatcattctgttcagaaggaggatgcatatacgacactt
agtggtcacagagctggtgaggctgcaattgtgtatgaacatggggctgatattgaggca
ttaatgccaaagcttcggcgttctgattactacacagagcctcggatccaggaattggct
gccaaggaaagggctaaaccagggttctgcaggcatgtgaaggactttgcagttggacgg
catggttatggcagcatcaaattcttgggtgagacagatgtgaggcgacttgatcttgag
gccttgattcagttcaataaccgtgaggtgattgtatatatggatgaaagcaagaaaccg
cctgttgggcaaggtctcaataagcctgctgagataacccttctcaacataaaatgcttt
gagaaaaagaccgggcaacagtatatagaagggcctaagattgagaaatacaaggagatg
cttaggaggaaggctgaggaccaaggtgcagagtttgtgtcctacgatgccaaaaaaggg
gagtggaagttccgggtcaaccacttcagtacgtacaaacttgacgatgatggagatgac
tggtgtactcaaacaacctcagtttgctaa
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