Tripterygium wilfordii (thunder duke vine): 119980674
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Entry
119980674 CDS
T07256
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119980674
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119980674
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
119980674
NCBI-ProteinID:
XP_038679400
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Position
16:complement(3093154..3096076)
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AA seq
397 aa
AA seq
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MTNNFQFSAIFLLLTSFIIQESNAASSYSTFDVINFGAKPDGRTDSTQPFLRAWSLACSS
IRPAIVSVPRGSFLVTSVAFSGPCKNKVTLNIVGTILAPMEYWKLGNSGYWILFYKVNRL
TINGGTLDARGAAFWACPKTHKTCPPGARSISFVRCGNLVVSGLRSINSQLFHIAIDESN
DILLQNLRIMAPSWSPNTDGVHTQASTGITIQRSIISTGDDCISLGPGSRNTWIERIACG
PGHGISIGSLGSSRYEDGVENVTVIGSVFSRTQNGVRIKSWARPSNGFVRDIQFRNLIMN
FVDNPIIIDQNYCPHGSKTCPNQSSGVKIRGVTYKNIKGTSGTNVAINLGCSSANPCQGI
KLQDIKLTYRYGAPRSYCANAHGTSSGFVIPASCLSR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaactttcaattttctgctatcttcctcctcctcacttccttcatcatccaa
gaatcaaatgctgcttcttcttattcgaccttcgatgtcatcaatttcggcgcaaagccg
gacgggcggaccgattccacgcagccattccttagggcatggtcattggcatgtagctca
ataaggccggccatcgtgagcgttccacgaggtagcttccttgttacatcagtcgctttt
agcggaccttgcaagaacaaggttacattaaacattgttggcaccattttagccccaatg
gagtattggaaacttggaaattctgggtattggatcttattctataaggtcaatagactt
accatcaatggtggtactcttgatgcaagaggagctgccttctgggcttgccctaaaacc
cacaagacctgcccgcccggagctcggtctatatcgttcgtgaggtgtggcaatcttgtg
gtgagtggattgagatccatcaacagccaattgtttcacattgcaattgatgaatccaat
gacattcttctccaaaacctgaggattatggcaccaagctggagtcccaacacagatggt
gttcacactcaagcttcaaccggaatcacaattcagaggagtattatatccaccggagac
gattgcatatccctcggtcctggctcccggaacacttggattgaacgtatagcttgtggc
cctggacatggaataagtataggtagtttgggttcaagtcgatatgaagatggtgttgag
aatgtaacagtgatcggctcggttttctcccgaacccaaaacggggttcggattaaatca
tgggcgagaccaagcaacgggttcgtgagagacattcagtttcgaaacctcataatgaat
ttcgtggacaatccaataatcattgatcaaaattactgtcctcatgggagcaaaacttgt
cctaatcagagttctggagtgaagattagaggagttacatacaagaacataaaaggaaca
tcaggcacaaatgtggctataaatttgggatgcagctctgctaatccatgccaagggatt
aaattgcaagacatcaagctcacatatcgttatggagcaccgagatcatactgtgcaaac
gcccatgggaccagcagtggatttgtcattcccgcaagttgtttatcaagataa
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