Tripterygium wilfordii (thunder duke vine): 119980847
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Entry
119980847 CDS
T07256
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119980847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119980847
Enzymes [BR:
twl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
119980847
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119980847
mRNA degradation factors
5'-3' decay
Decapping complex
119980847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
119980847
NCBI-ProteinID:
XP_038679573
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All DBs
Position
16:1494129..1499150
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AA seq
359 aa
AA seq
DB search
MKLFRLVDCFRFSISLLLDLIEETKGRLMSGLHRSSSTTPLKNGGPSPQELPPKELLDDL
CSRFVLNVPKEDLQSFERILFLVEYAHWFYEDNSVEKNPSLKSFNLKEFTWLLFNNCDVL
KPYAAHIDDIFKDFTSYKVRVPVTGAIILDQTYERCLLVKGWKGTSWSFPRGKKNKDEED
HACAIREVLEETGFDVSEFLKKDQYSEAIFGQQRVRLYVIAGVKDDTAFAPQTKKEISEI
AWQRLDELLPASDDVISRGITGLKLYMVAPFLASLRSWIAAHPPPVPPNLDRPLKGHCVW
KAKNASVGSSTIITESHPTKPATEPHSADTGPGTSFRNFKFDTAAILQAMEAGFSSSRG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatttaggcttgtagattgttttaggttttcaatttctcttcttttagattta
atcgaagaaacgaaggggcgtctgatgtcaggtctacatcgatcatcaagtactactccc
ttgaagaacggaggcccatctcctcaggaactccctcccaaagaactcctcgacgatcta
tgcagtcgatttgtcttgaatgttccaaaagaagacctgcagtcgttcgagaggattcta
tttctggtggagtatgcgcattggttctatgaggataattcagttgaaaaaaatccgtca
ctgaagtcattcaatctgaaggaattcacttggttactttttaacaactgtgatgtttta
aaaccttacgctgctcatatagatgatatattcaaggacttcacttcttacaaagttcga
gttcctgtaactggagcaatcattttggaccaaacatatgaaaggtgcttactggtgaag
ggatggaagggaactagttggagtttcccccgtgggaaaaagaacaaagatgaggaagac
catgcatgtgccatccgtgaagtcctggaagaaacaggcttcgatgtttcagaatttctg
aagaaagatcaatatagtgaggcaatattcggacaacagagggtgcgactgtacgtaatt
gctggtgtgaaagatgatactgcctttgccccgcaaaccaaaaaagagatcagtgaaatt
gcatggcagcgtcttgatgaacttctgcctgcaagtgatgatgtgatatctcgtggaatc
actggtctgaagctttacatggtggctccatttttggcttctttgagatcatggattgca
gcacatccacctcctgttcctcctaaccttgacaggcctctcaaaggacactgtgtgtgg
aaagcaaaaaacgcatctgtaggaagcagcacaattataacggagagccatccaacaaag
cctgcgactgaacctcactctgctgacacaggacctggaacgagcttcagaaactttaaa
tttgacaccgcagcgatcttacaagcaatggaagctggtttttcttcttcaagaggttaa
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