Tripterygium wilfordii (thunder duke vine): 119980922
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Entry
119980922 CDS
T07256
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twl03032
]
119980922
03400 DNA repair and recombination proteins [BR:
twl03400
]
119980922
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
119980922
DNA replication proteins [BR:
twl03032
]
Prokaryotic type
DNA Topoisomerases
119980922
DNA repair and recombination proteins [BR:
twl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
119980922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
KHA
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
119980922
NCBI-ProteinID:
XP_038679692
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All DBs
Position
16:836034..859890
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AA seq
931 aa
AA seq
DB search
MSLSSTIRLSYLFLGHNATRTRSLPLGPTSFLSLRQGLSGLRFCSAIPPRKSPKPVKARR
RAEETDGEEQGGNGSLLVKESDGRDGRVVPTELHKEATEAYMSYAMSVLLGRALPDVRDG
LKPVHRRILFAMHELGLASRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMSQDFSLRF
PLIQGHGNFGSLDGDPAAAMRYTECRLEALSEAMLLADLELDTVDFAPNFDNSQKEPSLL
PARLPNLLLNGSAGIAVGMATNIPPHNLGELVDVLCVLIHNPEATLQELLEYMPGPDFPT
GGIIMGNLGILEAYRTGRGRIIVRGKTDLELLDSKTKRTAVIIKEIPYQTNKSSLVEKIA
ELVENKSLDGISDIRDESDRSGMRIVIELKRGADPSIILNNLYRLTALQSSFSCNMVGIL
DGQPKQMGLKELLQAFLDFRCSVVERRASFKLSQAQQRRHIVEGIVVGLDNLDEVIRVIR
EAASNSAASAGLMSEFNLSEKQADAILDINLRRLTLLEGKKFVDESKSLAEQISKLEELL
SSRKHILQLIEQEANELKSKFSSPRRSALEDSDGGQVEDIDVIPNDEILLAISEKGYVKR
MKPNTFNLQHRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYFSDRGTVYSARAYKIQECT
RTATGTPLVQILSLSDGERITSIIPVSEFAGDQYLVMLTVNGYIKKVPLSLFSAIRSTGI
IAIQLVPGDELKWVRCCSNDDLVAMASQNGMVTLSSCENIRAQGRNTRGAVAMRLKNGDM
VASMDIIPANICKVKERESEDPESIGKGLGPWLLFVSENGYGKRVPLSSFRLSPLNRVGL
IGYKFSSEDRLAAVFVVGFSLAEDGENDEQVVLVSQSGTVNRIKVRDISIQSRYARGVIL
MRLEHAGKIQSASLISATEPEPELEELVANE
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttcttcgacaatccgtttatcctatctcttcctcggccacaatgctactcgt
actcgctccctccctctcggcccgaccagcttccttagtcttcgtcagggcctctcgggg
ctccgtttctgctctgccattcccccgcgaaaatctccaaagccagtcaaggcccggcgc
agagcggaggagacggacggggaagagcagggaggaaacggcagtctcttggtgaaggag
tcggatgggagagatgggcgtgttgtacccacggagttgcacaaggaggccaccgaggcc
tacatgtcttacgcaatgtctgtgttgcttggacgggcgctgccggatgtacgggatggg
ttgaagcctgtgcaccggcggattctatttgcaatgcatgaattgggccttgcatcaaga
aaaccattcaagaaatgtgctagagttgttggggaggttttgggcaaattccatccacat
ggagacacggcggtctatgattctttggtgcgaatgtctcaggatttctccttaagattc
ccacttatccaaggacatgggaatttcggttcacttgatggagaccctgctgccgccatg
cgttacacagagtgtaggctagaggcgctctcagaagcaatgctattggctgatctcgaa
ctagatacggttgattttgctcctaattttgataattcacaaaaggaaccttcgcttctg
cctgctcgacttccaaatttactgttgaatggttctgctgggatagcggttggcatggca
acaaacattcctcctcacaatcttggagagttggtggatgtgctttgcgtattgattcat
aacccagaagcaactttgcaagaattattggaatatatgcctgggcctgactttccaact
ggaggaataattatgggaaatcttgggattttggaggcatatcgaactgggagaggacgt
atcattgtcagagggaagaccgatcttgaattgcttgattctaaaacaaaacggactgca
gttatcataaaagagattccataccaaacgaacaaatcctcgcttgtggagaaaatcgct
gaacttgttgaaaataagagcttagacggcattagtgacattcgcgatgagagtgatcgt
tctggaatgcgtattgtcatcgagctgaagaggggtgcagacccatcaatcattttaaat
aatctttatcgtcttactgctctccagtctagttttagctgcaacatggttggtattctt
gatgggcaacctaaacagatgggtctaaaagaattgcttcaggcattcttagacttcaga
tgctctgtcgttgaaagacgtgcaagtttcaagctttcacaagcacaacaaagaagacat
atcgttgagggtattgtggtggggctagataatttggatgaagttattcgagtgattagg
gaagctgcaagcaattcagctgcttctgctggtttaatgagtgaattcaatctttctgag
aaacaagctgatgctatattggacataaatctgagaagacttacactactcgagggaaag
aaatttgtcgatgaaagtaaatccttggcagaacaaatttcaaagttagaagaactatta
tcaagcaggaaacacatattacagttaatagaacaagaagcaaatgagctcaagagtaag
ttctcaagtccaaggcgatcagcactggaagactctgatggtggtcaagtcgaggacata
gatgttattccaaatgacgaaatattactggcgattagcgaaaagggttatgttaaacga
atgaaacctaacacctttaatcttcaacatcgcggaacaattggtaaatcagttggaaaa
ctgagagtcaatgatgcgatgtctgactttattgtttgccatgcccatgactatgtgctg
tatttcagtgatcgaggaacagtatactcagctcgtgcatataaaatacaagaatgtacc
cgaactgctactggcactccactagtccagatcttatcgttatctgatggtgagaggata
acctctattatccctgtgagtgagtttgccggagatcaatatcttgtaatgcttactgtc
aatggctacatcaagaaagtacctctgtctctgttttcagcaatacggtcaacaggaatc
atagctatccaattggtccccggcgatgagctaaaatgggttcgctgttgctcaaatgat
gaccttgtagcaatggcttcacaaaatggaatggtcactcttagttcctgtgaaaatatt
cgagcacaaggcagaaatacaagaggtgcagtggccatgagattaaaaaatggggatatg
gtggctagcatggacataataccagcgaacatttgtaaagtcaaggagagagagtcagaa
gatcccgagagcattggcaaaggcttaggtccgtggttgttgtttgtgtctgagaatggt
tacggaaagcgagttcctttgagcagctttcgattgtcacccttaaacagagttgggtta
ataggttacaagttttcctcggaggatcgcttggcagcagtgttcgtggttggtttttca
ctagctgaagatggcgaaaatgatgagcaagtggtccttgtaagccagagtgggactgtc
aatagaattaaagtgcgggatatttcaatacagtcacgttatgcaaggggagttatatta
atgcggcttgagcatgctggaaaaattcaatcggcatccttgatctctgccactgagcct
gagcctgagcttgaggaattagtcgccaatgaatag
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