Tripterygium wilfordii (thunder duke vine): 119981075
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Entry
119981075 CDS
T07256
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB1-like isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03022
Basal transcription factors
twl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119981075
09124 Replication and repair
03420 Nucleotide excision repair
119981075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119981075
03400 DNA repair and recombination proteins [BR:
twl03400
]
119981075
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119981075
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119981075
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119981075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
119981075
NCBI-ProteinID:
XP_038679992
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All DBs
Position
16:10737462..10747911
Genome browser
AA seq
771 aa
AA seq
DB search
MGHGEKERPNKKLKSSVKQNDFQSGAIVEAGDVYFGEEADDGFRADEKEGKKRDFSKLEL
KPDHSNRPLWACADGRIFLETFSTLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAV
SVGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNHYFIESPFPEVLKK
LLRDEVISRARIGSEGSHGSDGFTISKAAGEIGTSDELLNEAELAAAAEEKETHSFEIDP
AQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPEAQPRPYQEKSLSKMFGNGR
ARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDEQICRF
TSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMF
RKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLAKGGFIANVQCAEVW
CPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALT
EYAMKLRKPMIYGATSHVERTKILQAFKTSREVNTVFLSKVGDNSIDIPEANVIIQISSH
AGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ
GYSFKVITSLPPADSGADLSYHRLDDQLALLNKVLSAGDDAVGLEQLEEDADDIALHKAR
RSMGSMSAMSGANGMIYMEYSTGKKLAGQGQMKSKPKDPSKRHYLFKRRFA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggacatggcgagaaggagcgaccaaacaagaaactgaaatcctctgtgaagcagaat
gatttccagagtggtgcgatcgtggaagctggggatgtttatttcggtgaggaagcggat
gatggtttccgtgccgatgagaaagaggggaagaagagggattttagcaaacttgaattg
aaacccgatcattccaatcgccccttgtgggcttgtgctgatgggcgaatattcctggag
actttctctactttgtataaacaagcctatgattttctcattgccatagctgagcctgta
tgcaggccagaatcgatgcacgagtacaatttgacccctcactctttgtatgcggcggtg
tcagtaggtcttgagacggaaaccatcatatcagttttgaataagttgtctaagaccaag
cttcccaaggagatgattgatttcattcatgcttcaaccgctaattacggaaaagtaaag
cttgtgctcaagaagaatcactactttatcgagtctccatttccagaggtattgaagaag
ttgctgcgagatgaagttatatctcgagcaaggattggttctgagggttctcatggaagt
gatggctttacaataagcaaagctgcaggcgaaattggaactagtgatgagttgttaaat
gaagcagaattagcagctgcagctgaagaaaaggaaacccactcatttgaaatcgaccca
gctcaggttgagaatgtaaaacaaaggtgcttgcccaatgctttgaattatccaatgctg
gaggaatatgacttcagaaatgatactgtcaaccctgatcttgacatggagctgaagcct
gaagcccagccacggccatatcaggagaagagccttagtaaaatgtttggaaatgggaga
gcaagatctggtattattgtattgccttgtggtgctgggaagtccttagttggtgtttcc
gctgcaagcagaataaagaagagttgcctttgtttagcaacaaatgctgtttcagttgat
cagtgggcatttcaatttaagctgtggtcaaccatcaaagatgaacaaatttgtcgtttc
acatctgatagcaaggaaagattccgtggcaatgctggtgttgtcgtgacaacctataac
atggttgcttttggtggaaaacggtccgaagaatctgaaaagattattgaggaaataaga
aatagagaatggggactccttctgatggatgaagtgcatgtggttcctgctcacatgttt
cggaaagtcatcagcatcactaaatctcactgcaaacttgggctcactgccacacttgtt
agagaggatgaaaggattacagatttaaacttccttattggtcccaaactgtacgaagca
aattggttggatctagcaaaaggagggtttattgcaaatgtgcaatgcgctgaagtatgg
tgtcccatgacaaaggagttttttgctgaatatctgaagaaagaaaattccaagaagaag
caggcactttatgttatgaaccctaacaagttcagagcttgtgaatttctcataagattc
catgagcagcagcgtggtgataagataatcgtgtttgcggacaatctttttgcactgaca
gagtatgcaatgaaacttcgaaagcctatgatctatggtgcaaccagccatgttgagagg
acaaaaattcttcaggccttcaaaactagtcgggaagttaacactgtctttctatcaaag
gtgggtgataattcaatagatattccggaggcaaatgtgataattcagatttcatctcat
gctggttcaagacgtcaagaagcgcaacgattgggtcgaattcttagggcaaagggtaaa
cttcaagataggatggcaggagggaaagaggagtataatgcatttttctattcccttgtt
tcaacagatacacaggagatgtactactcaacaaaaaggcagcagtttctgattgatcaa
ggttacagttttaaggtgataacaagcttgcctccagccgattcgggagccgacttgagt
taccatcgtcttgatgaccaattggcacttctcaacaaggttttgagtgctggtgacgat
gcagttggtctagagcagttagaagaagatgcagatgatatagccctccacaaagcccgt
cgctccatgggatccatgagtgcaatgtccggtgcaaatgggatgatttacatggaatac
agcactgggaagaagcttgccgggcagggccagatgaaaagtaagcccaaggatccatcc
aagcggcattatttgttcaaaagacgttttgcctga
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