Tripterygium wilfordii (thunder duke vine): 119981303
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Entry
119981303 CDS
T07256
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119981303
09123 Folding, sorting and degradation
03018 RNA degradation
119981303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119981303
03041 Spliceosome [BR:
twl03041
]
119981303
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119981303
mRNA degradation factors
5'-3' decay
Lsm complex
119981303
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119981303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
119981303
NCBI-ProteinID:
XP_038680293
LinkDB
All DBs
Position
16:complement(10032691..10036478)
Genome browser
AA seq
88 aa
AA seq
DB search
MSAGGEKGSATKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
QLKNKYGDAFIRGNNVLYISTSKTTLPE
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctggaggagagaaagggtcagcaactaagacgccggcagactttctcaagtca
attcgtggtcgaccggtggtcgtcaagctcaattctggagtggattaccgaggtattcta
gcatgtcttgatggttatatgaatattgcgatggaacaaactgaagaatatgtcaatgga
cagttgaaaaataagtatggtgatgctttcatccgtggaaacaacgttttgtacattagt
acatctaagacgactcttccggaatga
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