Tripterygium wilfordii (thunder duke vine): 119981307
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Entry
119981307 CDS
T07256
Name
(RefSeq) zinc finger CCCH domain-containing protein 40-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119981307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119981307
Spliceosome [BR:
twl03041
]
Complex B
Other components
Prp19-related factors
119981307
Complex C
119981307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
zf-CCCH
zf-CCCH_3
zf-CCCH_4
zf-CCCH_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
119981307
NCBI-ProteinID:
XP_038680310
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Position
2:complement(6786649..6790931)
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AA seq
499 aa
AA seq
DB search
MAHRLLRDYEADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGR
DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE
EHDRRARAGIDYESSYGKVRPNDTIMKLQRTSPYYKRNRAHICSFYVRGECTRGAECPYR
HEMPMTGELSQQNIKDRYYGVNDPVALKLLGKAGEMPSLEPPEDESIRTLYVGGLDARIT
EQDLRDNFYAHGEIESVKIVLQRACAFVTYTTREGAAKAAEELSNKLVIKGLRLKLMWGR
PQALRSETEGSDEARQQAALAHGGMLPRAVISQQQSQLQPGNQDQPPPMPYYNIPPPIQQ
ERTFYPSMDPQRMGALIPSQDEAPNGPAGSGEKKAGPEKQHQAQHYPYQAMPPPHGQFHG
QPYLPYGYMMPPPPPPYHQYPPQYPSTMPQQQGAHMTQQYQHSGPPRAAPPSSTSSGPAP
PLPTSSGPSASTSSAPGSS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatagattgttaagagattacgaggccgatggatgggagcgctcggatttccct
ataatctgcgagtcctgcctcggcgacaatccgtatgttcgaatgacaagagcagattat
gacaaagagtgtaagatctgcacacggccattcactgtttttaggtggagacctggtcgt
gatgcaagattcaagaaaactgaggtttgccagacatgtagcaagttaaaaaatgtttgt
caagtctgtctcttggatcttgaatatggtttaccagttcaggttcgagatacagcactc
agtatcaattccaatgatgccattccgaagagtgatgtgaacagggaatattttgcagag
gagcatgaccgtagggctagagcaggtattgattatgaatcatcttatgggaaagtgcgg
ccaaacgacactattatgaagcttcaaaggacatcaccatactataaaaggaaccgagca
catatatgcagtttttatgttcggggtgaatgcacacgaggggctgaatgcccttatcga
catgagatgcccatgactggggagttgtcacagcaaaatataaaagatcgttactatggt
gtgaatgatcctgtggcgctgaagctgcttggcaaggccggtgaaatgccttcactggag
cctcctgaggacgaaagcattaggactctgtatgttggtggtcttgatgcaaggattact
gaacaggatttaagggataacttttatgcacatggcgaaattgaatctgtaaagatagta
cttcaacgagcatgtgcatttgtgacctacacaaccagagaaggagcagcaaaggctgca
gaagagctctctaacaaacttgtcattaagggtttgagactgaagctgatgtggggtagg
cctcaagcattgagatctgagactgaaggctcggatgaagcaaggcagcaggcagcattg
gcacatggaggtatgttgcctcgggcagtcatatctcaacagcagagccagttgcaacct
gggaaccaggaccagccaccaccaatgccctactacaatattcctcctccaatccagcag
gaaagaaccttttatccgtcaatggatcctcaacggatgggtgcacttattccatctcaa
gatgaggctcctaatgggcctgcaggttctggtgagaagaaagctggacctgagaagcag
catcaggctcagcattatccttatcaagcaatgccgcctcctcatggacaatttcatggg
caaccttatctgccatatggatatatgatgccaccaccgccaccaccctatcaccagtac
ccacctcaatacccttctacaatgccacagcagcagggcgctcatatgacacagcagtat
caacattctggacctccaagagctgcacctccatcatctacttcctctggtcctgcccct
cctctgcccacttcctctgggccttcagcatctacatcctcagcgccagggtcgtcctaa
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