Tripterygium wilfordii (thunder duke vine): 119981792
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Entry
119981792 CDS
T07256
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119981792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
119981792
Spliceosome [BR:
twl03041
]
Complex A
U1 snRNP components
U1 related factors
119981792
Complex B
119981792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
SMODS
Motif
Other DBs
NCBI-GeneID:
119981792
NCBI-ProteinID:
XP_038680853
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Position
17:complement(10769582..10788221)
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AA seq
1017 aa
AA seq
DB search
MDPSRSFMPPMSNQFRPVVPGQQSQQFIQAAPPHFQSVGRGVSAINNGLPSPQVQQPQFP
QLMQQLPARPGQGLGPPPSQATSLPNAPPSMHVASGSPLPMPNVQAPNNYMPGFGGPGTP
LLSSYTFAPSSYGQRPVTFNAMTHYQPISQMHAPTIPAGGQPGLSPVNQIAASVIPLHQS
VQQSAVSSISVRETNLQTKLTEQAPTDWIEHTSANGKRYYHNKRTRQSSWVKPVELMTPV
ERADASTDWKEFTSPDGRKYYYNKVTKQSKWEIPEELKLARERVGMRSEKETQQETSANP
HGLASVTPLDEAPSTMDVSAATAQGATSSPVAISPVGTSDNIQSGMIAESSALPVEASPV
IDRADGAQGTLNTVPPSAGTSGSSEAAVTMVDVFTAPMNDSCNIAAEDVPNSADGFPAED
KEEASTDVMASEKAELEDKVVDQEHTGYVDKLEAKSSFKSLLESANVGSDWTWEQAMRVI
INDKRYGALRTLGERKQAFNEFLGQKKKREVEERRIKQKKAREEFTKMLEESTELTSSTR
WSKAMVIFENDERFKGVERERDRRDLFESYLEELGKKERVKAQEERKSNIMEYREYLESC
DFIKASTQWRKVQDRLEADERCSRLEKIDRLEIFQDYVRDLEKEEEEQRRKQKEDLRKAE
RKKRDEFRKLMEEHLSAGALTAKTHWRDYYLKVKDLPAYLDVASNTSGPTPKDLFEDVAE
ELEKQYHDDKTRIKDAVKLKKVALSSSWTLEEFRASIAEEIGSPPISDVNLKLILDELLE
RVREKEEKEAKKRKRLADDFRDLLHSIKEINASSRWENSKELFQGSREYSSIGVENFCRE
IFEEYITELQEQAMEDDRKRKEKVKKEKDREGRDRKKSKHRREKDRGHDREKEQHLSKDG
GDIEIADTTEVRGFNEDKRSESDNSKKQRNRHEIADNSNDGEKDRSKNSNKHNSDHKKSR
RQHVSTPESDGESKRKRHKRDHRNGSRNGHREDLEDGEYGNDGQNTVSRGKDSELVN
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctcgaagttttatgcctcccatgtctaatcaatttcgacctgtagttcca
ggacagcaatcacagcagttcattcaagctgctcctccacattttcagtctgttgggcgc
ggcgtctctgctataaacaatgggttgccttctcctcaagttcagcaaccccagtttcct
cagttaatgcagcagttaccagcaagacctggccagggcctgggaccaccaccatcacag
gcaacatcattgcctaatgctcccccaagcatgcatgttgcatctgggtcaccattgcct
atgcccaatgttcaagcacccaacaactacatgcctggctttggtggcccaggaacacct
cttctttcatcatatacttttgcgccgtcttcttatggtcaaagacctgtgactttcaat
gctatgactcactatcagcctatatctcaaatgcatgccccaacaattcctgctggtgga
cagcctgggttatctccagtaaatcaaattgctgcttctgttatacccctccatcagagt
gttcaacaatctgcagtttcctccattagtgttcgagaaacaaatcttcaaactaaactt
actgaacaggcccctactgattggatagaacatacttcagctaatggaaaaagatattat
cataataagaggaccagacaatcaagttgggtgaagcccgtagaattaatgactcctgtt
gagagggcagatgcatcgactgactggaaagaatttacgagccctgatggaagaaagtat
tactacaataaggttaccaagcaatcgaaatgggagatacctgaagaactgaagttggct
cgtgaacgggtgggaatgagatccgaaaaggaaacacaacaggaaacatctgcaaatcct
catggcctagcttctgttactcctttagatgaggctccatctacaatggatgtttcagct
gccacagctcaaggggcaacatcaagcccagttgccatttctcctgtaggcacttctgat
aatatacaatctgggatgattgctgaatcttctgccctgcccgttgaagcttctcctgta
attgaccgtgctgatggagctcagggaactttaaatactgttccaccatcagctggcact
tcaggaagttctgaggctgctgttaccatggtggacgtatttactgctccaatgaatgat
tcttgcaacatcgctgctgaagatgttcctaattctgcagatggttttcctgcagaagat
aaagaggaagccagcacagatgtgatggctagtgaaaaagctgaattggaagataaagta
gtcgatcaggaacatacaggttatgtggataagctggaggctaaaagttcatttaaatct
cttcttgagtcagcaaacgttggttctgactggacatgggagcaggccatgagagtcata
attaatgacaaaagatatggtgcattgaggacacttggagagagaaagcaagcttttaat
gagttccttggtcaaaagaaaaaacgggaggttgaggaaaggcgaattaaacagaaaaaa
gcaagggaagagtttacgaaaatgttagaagaatctacagagctgacatcatctactaga
tggagcaaagctatggttattttcgaaaatgatgagcgatttaaaggggttgaacgagaa
agagatcgcagggatttgtttgaaagctacttagaggagcttgggaaaaaggaacgagta
aaggcccaggaggagcggaaatcgaatatcatggaatatagggaatatctggaatcttgc
gacttcattaaggcaagcacccagtggcgaaaggtgcaagatcgcttagaggctgatgaa
agatgttcacgtcttgaaaaaattgatcgcctggaaatatttcaggattatgtacgtgac
ttagagaaggaagaggaggaacagaggaggaaacaaaaggaagatctgcggaaggcggaa
cgcaaaaaacgcgatgagttccgtaagttgatggaagaacatctttctgctggggcactt
acagcaaaaactcattggcgtgattattatctgaaggtaaaagatttgcctgcatatttg
gatgttgcatcaaacacttcaggtccaaccccgaaggatttgtttgaagatgttgctgag
gagcttgagaagcagtatcatgatgataaaactcgaattaaggatgctgtgaagttgaaa
aaggttgctttatcatcaagctggacacttgaagaatttagggcttctattgccgaggaa
ataggctctccacctatatcagatgtcaacttaaagctaatacttgatgaattgctagaa
agagtcagggagaaggaggagaaggaagctaaaaagcgtaaacggcttgcagatgatttt
cgtgatctactgcactccatcaaggaaattaatgcttcttcgaggtgggagaacagcaaa
gagctttttcaaggtagtagagagtacagttccattggagtggagaatttctgcagagaa
atatttgaggaatatatcaccgagctgcaagaacaggcaatggaggatgaccgaaagcga
aaagaaaaggtaaagaaagaaaaagatagggagggaagagataggaaaaagtctaagcac
agaagagaaaaagatcgaggacatgatagggaaaaggagcagcacttgagtaaggatgga
ggagacatcgaaattgctgatacaactgaggtccgtggtttcaatgaggacaaaagatca
gaaagtgacaatagtaagaaacaacggaacaggcatgagatcgcagataattccaatgat
ggagagaaagatcggtcgaagaattccaataaacataacagtgaccacaaaaagtcgaga
aggcagcatgtatcaactcctgaatcagatggtgaaagcaagcgcaagaggcataaaaga
gaccaccggaatggttctcgtaatggtcatcgcgaggatcttgaagatggggaatatggc
aatgatggtcaaaacactgttagcagaggtaaagacagtgaactcgtgaactag
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