Tripterygium wilfordii (thunder duke vine): 119982166
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Entry
119982166 CDS
T07256
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119982166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119982166
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119982166
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps8
Clathrin
WD40
ANAPC4_WD40
MinC_N
Motif
Other DBs
NCBI-GeneID:
119982166
NCBI-ProteinID:
XP_038681325
LinkDB
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Position
17:complement(11485910..11501285)
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AA seq
1973 aa
AA seq
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MTKKLSHSKLHMELDLDSFLDSISDEESNSVPYRTIDEILNESDSSTPTSSPPSPPAIHL
RRPSDLHHTQKEAAFVSSTESLRPAQSSVDNLEHSRRSSSSALLRPGELSGDPIRRVPSS
SRNLPSLFGGVRANTKPGAALAAAVAASRSVPTPHAAAIKSRRAGSGLVQKVDGYDREIV
SNYSSGDSGVVSVTSNGSGDKLAQQDDESADFESALGDINSEFWRKEGELDKARGSAEVS
ASVDTEGEVRDLDPGYVDNDFHSTSTSVVDSQAEPQNDFSSPYTKSDNTLDDNSANLHLD
EIEGENVVVGDEIPKVLDTNDSLPKNDMNGKVEEELTVVAMEQENMEKDIPSFKDYEVGV
GGADASLTSDIPDLVKEKIEQLESERVSRREERKSRSSMKPLELAEELEKRQASTGLHWE
AGAAAQPMRLEGVRRGSTTLGYFEFDADNIVTRTISSPAFRRDHGSPQVLAMHFNYIAVG
MSKGIIVVVPSRYSVHNADSMDASKMLMLGLHGDRSHAPVTSMCFNQQGDLLLAGYADGH
ATVWDVQKGSAAKVITGEHTAPVLHTLFLGQDSQATRQFKVVTGDCKGLVLLHACSVVPL
LNRFSIKTQCLLDGQKTGTVLAASPLHFEEYSGGALSSSVGNSTVSTSSIGSMMGGVVGG
DAGWKLFNEGSSSVDEGVVVFVTHQTALVVRLSPTLEVYAHLPKPDGVREGSMPYTAWKC
TSQSAVPSDENNPVEVTERVSYLALAWDRKVQVAKLVKSELKVYGKWSIDSPAIGVAWLD
DQMLVILTLTWKLYLFAKDGTIIHQTNFAIDGTGGDDLIAYHTHFFNIFGNPEKAYHNCV
AVRGASIYVLGPIHLIISRLLPWKERIQVLQRAGDWMGALNMAMTLYDGQAHGVIDLPRS
LDDVQQAIMPYLVELLQSYVDEVFSYISVAFCNQIGKMEEEDDSKGRNSSVRSEIKEQYT
RVGGVAVEFCVHIMRTDILFDDIYSKFVAVQHKDTFLELLEPYILRDMLGSLPPEIMQAL
VEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYGALVYLFNKGLDDFRTPLEE
LLVVFRSSQRESATALGYRMLVYLKYCFTGLAFPPGQGTLSPARLASLRTELVQFLLENS
NAMNSLAVSSLLSGGAYLNLYHLLKLDTEATLDVLKCAFVDDELTEVDLSLHDSSNANVE
EEKKADMAARWQNSVIQNTIDALVYIVDKDVSQKDEDASTDNSGLVEVWPSKKDVGRLFE
FIAYYVASSRAHVTSSVLGMILEYLTSEDNSFPIAFRHSMITSKRREKQVLALLKVVPET
DWNAFRVLDLCEKANFFQVCGLIHTLRHEYLAALDSYMKDLEEPIHAFSFINNTLLQLSD
NERETFQSAIISRIPELVGLSREGAFFLILDHFHNEGPQILSELRSHPKSLFLYLKTVIE
VHLSGMLNFSDLRKGDTMEVSNGTRMKDLSKGFEAYLKKISDFPRLLRNNPVHLTDDMTE
LYLELLCQYERDSVLQFLETFDSYRVEHCLLLCQKYGIIDAAAFLLERVGDAGSALLLTL
SSLNGKFVELGIAVKTAVSNVALSDPASLQCFSIISKINEVKVVRSILHACIGLCQRNTP
RLNPEESETLWFTLLDSFCKPLMDTHVDEMESKRENHVRIVAESLGTVKDEEAHIIKWKI
SKSQGVAHILKKLFSQFIKEIVEGMMGCVRLPTIMSKLLSDNANQEFGDFKLTILGMLGT
YGFERRILDTAKSLIEDDTFYTMSLLKKGASHGYAPQSLLCCLCNCLLLKNSSSPEVRVF
NCGHTTHLHCEILENDVPSRGIPSGCPVCMPKKNNQRSIKNSDLTENALVYMSPSRSQQV
QGGSALNSHENDSLENSYGLQQISRFAILTNLEKDQRLFQIENLPQLRLAPPALYHEKVK
KSADHFRAESSSGLGKIEKPNRNRQLKDLKVKGSSLRFPLKSNIFSKEKTRKH
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaagctctcccacagcaaactccacatggaactcgaccttgactcttttctc
gactcaatctctgatgaagagtccaattcagtcccttaccgcactatcgatgaaatactg
aacgagtccgattcctctacccccacctcctcacccccatccccaccggccattcacctt
cgccggccatcagatctccatcacacacaaaaagaagccgctttcgtctcttcaacagaa
tcgctaagacccgctcaatcgtctgtcgataacctcgagcattcgagaaggtctagttcg
tctgccctgttgagacccggggagttgtcgggtgatccaattcggagagttccttcgtct
tcacgaaatttgccgtcgctgttcggcggggtaagggcaaacacgaagccaggcgccgca
ctggcggctgcagttgcagcctcgcggtcagtgccgaccccccacgcggctgcgatcaag
tctaggagggctggaagtgggctcgtgcaaaaggtggatggttatgatcgggagattgtg
tcaaattattccagtggggactccggtgtagttagtgtaaccagtaatggctccggtgat
aaattagcacaacaagacgatgaatccgctgattttgaatccgctctaggagatattaat
agtgaattttggaggaaagaaggagaattggacaaggcacgaggcagtgctgaagtatct
gcgagtgtagatactgaaggcgaagttagggatttagatcccggctacgtagataacgat
tttcacagtacaagtacttcggtcgttgattcccaagctgagccacagaatgacttttct
tcaccttacactaaaagtgacaacactttggacgataactctgcaaatttgcatttggat
gaaatagaaggtgagaatgtagtagtaggggatgaaattcctaaggttttggataccaat
gattctttgcccaagaatgatatgaatggaaaggttgaggaggaattgactgtagtggca
atggagcaagagaacatggagaaggacattcctagctttaaagattatgaagttggtgtt
ggaggtgctgatgccagtttgacaagcgacattccagatcttgtaaaagagaaaatcgag
caacttgagagtgaaagggttagtagaagagaggaacggaaatcacggtcttccatgaag
ccacttgaattggctgaagaactagaaaagagacaggcttctactggtttgcactgggaa
gcgggtgctgctgctcaaccaatgaggcttgagggcgtccgcaggggatccactactttg
ggatattttgaatttgatgctgacaatattgttacacggaccatttcatcaccagctttt
agacgtgatcatggttcccctcaagtcttggccatgcatttcaactatattgcagtggga
atgtcaaagggcatcattgttgttgtgcccagtcgatactctgttcataatgctgatagc
atggatgcttctaagatgttgatgcttggtttgcatggggatcggtctcatgccccggtc
acttccatgtgctttaaccagcaaggtgacctgcttttagctggatatgcggatggtcat
gccacagtttgggatgtccaaaagggatcagcggcaaaggtcattactggagaacatact
gctccagttctacatacactttttttagggcaggattctcaagctacccgccagtttaag
gtggttactggtgattgtaaaggtctagttctcttacatgcttgctcagtagttcctctg
cttaataggttctccatcaaaactcagtgtttacttgatggacaaaaaacgggtactgta
ttagcagcttcgccccttcattttgaggaatactctggaggtgctttgtcatcatctgtg
ggaaattcaacagtgtcaaccagtagcattggtagcatgatgggaggtgtagttggtggg
gatgcaggatggaaactgttcaacgaaggctcttcttcagttgacgaaggtgttgtcgta
tttgtcacccatcaaactgctttggtggtgaggctcagtcctactttggaagtttatgca
catcttcccaagccagatggggtacgggagggttccatgccttacactgcctggaaatgt
acttctcaatcagctgtcccttcagatgaaaataatcctgtggaagtcacagagagagtt
tcataccttgcacttgcttgggaccgtaaagttcaggttgcaaagttggtcaaatcggag
ctaaaagtttatgggaaatggtccattgacagtccagccataggtgtggcttggttagat
gaccagatgctggtgattttgacattgacatggaaactttatctgtttgcaaaagacggc
actataattcaccaaacaaattttgctatcgatggtactgggggagatgatctcattgcg
tatcatactcacttcttcaatatttttggaaacccggagaaggcttatcacaattgtgta
gctgtgagaggtgcttctatatatgttctgggaccaattcatctcattatttctcgcctt
ctcccctggaaggaacgtattcaggttctgcaaagagcaggcgactggatgggagcctta
aacatggcaatgacactgtatgacgggcaagcacatggtgttattgaccttcctaggtcc
ttagatgatgtacagcaagcaataatgccatatctggtagagttgctacaatcatatgta
gatgaagtcttctcctatatttcagtggcattttgcaaccaaattgggaaaatggaagaa
gaagatgattcaaagggtaggaatagctcagtgcggtctgaaataaaggagcaatacact
cgtgttggtggtgttgctgtagaattttgtgtccacattatgcgaactgacattcttttt
gatgacatttactccaagtttgtggctgttcagcacaaagatacttttctggagcttttg
gagccatatatattgagggatatgcttggatctctacctccggagattatgcaagcactg
gtagagcattatagcagcaagggctggttgcagcgagtcgaacaatgtgtcctccacatg
gacatatcttcattggatttcaatcaggttgttaggttatgccgagagcatggattgtat
ggtgcccttgtatacctgttcaataaaggattggatgatttcagaacacctttggaggag
ctgttggtggtttttagaagtagccaaagagaaagtgctactgccttggggtacagaatg
cttgtttatttaaagtactgtttcacaggtcttgcttttccaccaggacaaggaactctt
tctcctgcacgcttagcatctctcaggacagaacttgtgcaatttttactggaaaattct
aatgccatgaattcgctagcagtttcaagcttgttatctggaggagcatacctgaacctg
tatcatctcttaaagttggatactgaagctactttagatgttctgaaatgtgcttttgtt
gatgatgagctcacagaagttgacctttctttacatgattcctcgaatgcaaatgtggag
gaggagaaaaaagctgatatggcggctcggtggcagaattccgtgattcagaatacaata
gatgctctggtttacatagttgacaaggatgtttctcaaaaggatgaagatgctagtact
gataatagtggattagtagaagtatggccttcaaagaaagatgtcggtcgcctgtttgaa
ttcattgcatactatgttgcaagtagcagagctcatgtcacgagcagtgtgctgggtatg
attctggagtatttgacatcagaagacaattcttttccaattgctttcagacatagtatg
ataacttcgaaaaggagagagaagcaggtacttgcacttctgaaagttgtgcctgagact
gattggaatgcctttcgtgtgttggacctatgcgagaaagctaactttttccaggtttgc
ggattaattcatactctcaggcatgagtaccttgctgctttggacagctatatgaaagat
ttggaggaacccatacatgccttctcctttatcaacaatacattattgcagctgagtgac
aatgaacgtgaaacttttcagtcagctatcatttctcggattccagagctagttggtttg
agcagagagggtgctttcttcttgatccttgatcattttcataatgaaggtcctcagatt
ctctctgaacttcggtcccatccaaaaagcctcttcctttatttaaagacagtgattgaa
gttcatttgtctggaatgttgaacttttctgatcttagaaaaggtgatacaatggaagtt
tccaatggaacaaggatgaaagatctgtcaaaaggatttgaggcttacttgaagaaaatc
tccgattttccaaggttactacgtaataatcctgttcatttgactgatgatatgacagag
ctttacttggagctattatgtcagtatgaacgtgattcagttctccaattcttggagact
tttgatagctatcgggtggaacactgtttgcttctttgtcagaaatatggcatcattgat
gctgctgcatttttgctagaaagagttggtgatgctggcagtgctctgttacttacactt
tctagccttaacggtaaatttgttgaacttggtattgctgtgaagactgctgtttcaaat
gtggctttaagtgaccctgcaagtttgcagtgttttagcattatttccaagataaatgag
gtgaaggtcgtgcgtagtatattgcatgcctgcattggattgtgccagcgcaacacccct
cgtttaaatcctgaggagtcagagacactctggttcacattacttgactcattttgtaag
cctttgatggatacacatgttgatgaaatggaatctaaaagagaaaatcatgtgagaatt
gttgctgaatcattgggcacagtaaaggatgaagaggcacacattatcaagtggaaaatc
tcaaaatcccaaggggttgctcatatattgaagaaattattctctcaattcatcaaagag
attgttgagggaatgatgggatgtgttcgccttccaactatcatgtctaaactcctttct
gataatgctaatcaggaattcggcgactttaaacttacaatactaggcatgcttgggacg
tacggctttgaacggagaattctggacactgccaagtctttgatagaagatgacacgttc
tatactatgagcttacttaagaagggggcctctcatgggtatgccccacagagtctacta
tgttgtctttgtaactgcctgcttttgaaaaattcttcaagtcctgaagtgcgagttttc
aattgtggccatacaactcatcttcattgtgaaattctggaaaatgatgtcccaagtcga
ggcattccatctggatgccctgtttgtatgcccaagaagaataatcagaggtccataaaa
aattctgatctcactgagaatgctctagtatatatgtctccgtcaaggtcccagcaagta
caaggaggctctgctttgaactcacatgaaaatgactcattagaaaattcctatgggctt
caacagatatcacggtttgcgatcttaactaatcttgagaaggatcagagattattccaa
attgaaaatttgcctcagctgaggcttgcacctccagctttataccatgaaaaggtaaag
aaaagcgcagatcacttcagagctgaaagtagcagtggtcttggaaaaattgaaaaacct
aacagaaacaggcaactcaaggatttgaaggttaaaggatcatctcttcggttcccatta
aaatcaaatatattcagcaaggagaagacaaggaaacactga
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