Tripterygium wilfordii (thunder duke vine): 119982397
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Entry
119982397 CDS
T07256
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119982397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
119982397
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119982397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_22
AAA_16
RNA_helicase
NPHP3_N
AAA_2
TIP49
AAA_17
AAA_33
AAA_28
nSTAND3
IstB_IS21
NACHT
AAA_3
Viral_helicase1
AAA_18
Rad17
Bac_DnaA
Mg_chelatase
NB-ARC
ATPase_2
Parvo_NS1
TsaE
AAA_19
ABC_tran
AAA_11
Vps4_C
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
119982397
NCBI-ProteinID:
XP_038681667
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All DBs
Position
17:2350334..2363532
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AA seq
997 aa
AA seq
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MERKSIRHRLDECQKNFGDSVMEIRTKNPDWAVMGRESLRDHLDECQKNFRESVIEQTVD
HLRTNPSDPDIIKYQPLYKIVHETLQRQNSAVGETTISSPPPTNPTDYSDSNPRTFYRQV
QQIRQQLNRTGNTTMPSPLPTKPSDHSNISPQQNSIGNATMSSPLPTNTYDYSIFNPQVR
HPNSIGNTTIPSLLPTNPSDHSRILPQLQQQIDMAKTTMPSPLPTNPFGYSHLRPHLQQQ
DTIGKITNPTPPPANPSEYSQIKPQQQQISSIGKTAMASPVPTNPSHIKPQLPQQNSIGN
ITIPYPCHNEKEQLHLHDKKRKFYDFDNAALRNKQTSNLGGSSTPTLSSSKSKASTATLG
ENIVGEGTPKLREKANNIGLDVMTGDNKGNRANLVLNKELVSNGSNCGSVVKKNKCPMFR
DLAGMAEVIKELNTEVLLPLKYSRLARWMGVPPASGILLHGPPGCGKTKLAQAIANETGL
AFHMISAADLVSCVIGGSEKNIRELFAKAYRTAPSIVFIDEIDAIASKRENLQREVEKRM
VTQLLTCMDESHKIEQTAASYSSIESSSHRPGYVLVIGATNMPDAIDSALRRPGRFDLEI
NLGAPDENARFEILSVITKNLRLEGSIDLAKIARTTPGFVGADLEALVKKAGRLAMGRIF
DQRKAELSKECIDEEYIEGQLSHLEDTDKCVITKADFEEAISMIPSLRREGFSAIPGVKW
EDIGGLDSLREEFELNIVKRIKYPEVYSRFGADLQTGFLLYGPPGCGKTLIAKAVANDAG
ASFIHIKGPELLHKYVGESERSVRTLFSRARACSPCILFFDEVDALTKKRTGTEWGAVNE
RLLNQLLIELDGADQRQSVFVIGATNRPEVMDQAVLRPGRFGKLLYVPLPSPTERGLILK
AVAKKKPVDVTVDLGSIAQMEACKNFSGADLTALMHEAATAALKEKLNSISIESCSDTNS
WTIKTTHFEQALAKISPSVSEEQIKHYKDLKNTFKVA
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaaatccattcgccatcgccttgatgagtgccagaaaaacttcggagacagt
gtaatggagatcagaacgaagaatccggactgggctgtcatgggccgagaatcccttcgc
gatcaccttgatgagtgccagaaaaacttcagagagagtgtaattgagcagacggttgac
catctgcgcacaaacccctccgatccagacatcattaagtaccagcccttatacaaaatc
gtccatgaaaccctacaacgccaaaacagtgccgtcggagagaccacgatttcctctcct
cctcccacaaaccctaccgattactccgacagcaatccccggaccttctacagacaagtc
cagcaaatccgacagcagctaaacagaaccggaaacaccacaatgccgtctcctctgccc
acaaagccctccgatcattccaacatcagtccgcaacaaaacagtatcggaaatgccaca
atgtcgtctcctttacccacaaacacctatgattactccatcttcaatccccaggtacga
catccgaacagcatcggaaacaccacaattccgtctcttctgcccacaaacccctccgat
cactcccgcatcttgcctcagctacaacagcaaatcgatatggcaaagaccacaatgccg
tctcctctacctacaaaccccttcggttactcccacctaaggccccacttacaacagcaa
gacaccatcggaaagatcacaaatcccactccaccacctgcaaatccatccgagtactcc
cagatcaagccccagcaacaacagataagcagcattggaaagaccgcaatggcctctcct
gtgcccacaaacccctcccacatcaagccccagctaccacagcaaaacagcattggaaac
atcacaataccttatccctgccacaacgaaaaggaacagcttcatcttcatgacaagaaa
agaaaattttatgattttgacaatgcagctttaagaaataagcaaacaagtaatctgggt
ggttcttctactccaacattatcatcctccaaatcaaaggcatccacagcaactttagga
gagaatatcgtgggagaaggaactccaaaattgagggaaaaggcgaataacattggattg
gatgtgatgacaggggacaataaggggaacagagctaatttggtccttaataaggaattg
gtttcaaatggtagtaattgtggttcagtggtgaagaagaacaaatgtccaatgtttagg
gatttggcgggtatggctgaagtgattaaggagttgaatacagaggtgctgttgccgttg
aaatattcgcgattggcacggtggatgggagtgccacccgcatctgggattttgcttcat
ggcccacctggatgtgggaagactaagttggctcaagccattgcaaatgagactggtctt
gcatttcacatgatttcagctgctgatttggtatcttgtgtgataggtggctctgaaaaa
aatatacgagaacttttcgcaaaagcttataggactgcaccttccattgtattcattgat
gagattgatgccattgcctcaaagagagaaaatctgcagagggaagtggagaaacgcatg
gtgacacaattgttgacttgcatggatgaatcgcacaaaatagaacaaacagctgccagt
tattcaagtatagagagctcttctcatagacctggatatgttcttgtaattggagctacc
aatatgcctgatgctatagactctgcactaaggagacctgggcggtttgatctcgaaatc
aatttgggtgctccagatgagaatgcaaggtttgagattctctcagtgattactaaaaat
cttaggcttgagggttctattgatcttgcaaaaatagctaggacaacaccaggttttgtt
ggagctgacttggaagctctggttaaaaaagctggccgtcttgcgatggggcgaatcttt
gaccagaggaaagctgagctatctaaagaatgtatagatgaggagtatattgaagggcag
ttaagtcatcttgaagatacggacaagtgtgtcatcactaaggctgattttgaggaagca
atttcgatgataccctcattgaggagagaagggttctctgcaattcctggtgtaaaatgg
gaagatattggcgggcttgattctttaagggaagagtttgagctaaacattgttaagcgc
ataaaatatcctgaagtttactcgagatttggagctgatttacagacaggttttttgctt
tatggaccaccagggtgtggtaaaacattaattgcaaaggctgttgctaatgatgcagga
gctagttttattcacatcaagggtccagaactgctgcataaatatgttggagaaagtgag
cggagcgttaggacattattcagccgtgcaagggcgtgttcaccatgcatacttttcttt
gatgaggtggacgctttgacaaagaagcgtactggaacagaatggggagcagttaatgag
cgtctcctaaaccagttacttatagagttggacggtgctgatcaacggcaaagtgttttt
gtcattggtgccactaataggcctgaggtgatggaccaagctgtcttacggcctggtaga
tttggcaaacttctatatgtcccccttcccagtcccactgagcgtgggttgatcttaaaa
gctgtagccaagaagaaacctgtagatgttactgtggacttgggttccattgcccaaatg
gaggcttgtaaaaattttagtggagctgatcttactgcactgatgcatgaagctgcaact
gctgctttaaaagaaaaattgaacagcatatcaattgagagctgttcagacactaattca
tggacaatcaagacaacccattttgagcaggcactagctaaaatctctccatctgtgtca
gaagagcaaataaaacactacaaggatctgaagaataccttcaaagtagcataa
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