Tripterygium wilfordii (thunder duke vine): 119982399
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Entry
119982399 CDS
T07256
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
119982399
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119982399
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
Helicases
119982399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ATPase
nSTAND3
ResIII
AAA_19
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
119982399
NCBI-ProteinID:
XP_038681673
LinkDB
All DBs
Position
17:961645..970110
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AA seq
1340 aa
AA seq
DB search
MEVSAENAGQSMMDLKCEKDSLSMQDGDSNALILPAKRTKKRKGMNADEMAKMKKCPKLS
KSQKRKLIQLEEEKQKAFLLSKSIENLEKYKISEDAHSLLRSSKNISRVETVKEKHRMAV
QFSKLGLEVPSSDQYAKIKSSDESCESEPGLDESHIRQDRRENDSLRPIIVEREVLDKAS
YSFFPSQWQVCSNDFGLNGGYVADQPPEELPSDEIVKSIQEDARISSLSLRSCDEKESSE
SRSKLGESLNANVSKESNLPNSLQQGPCRPSTVVHVSRPSEIENQRIDLPIVMMEQEIME
AINENSTVIVCGETGCGKTTQVPQFLYEAGFGSKHYTDRSGIIGVTQPRRVAVLATAKRV
AFELGFHLGKEVGFQVRHDKRIGDKCSIKFMTDGILLREVQNDFLLKRYSVIILDEAHER
SLNTDILIGMLSRIIQLRQDLFEKQQKLLLYGQIVSPEDMIFPLKLVMMSATLRVEDFIS
GKKLFRNPPPVVEVPTRQFPVTVHFSKKTEIVDYIGQAYKKVLAIHKRLPPGGILVFVTG
QREVEYLCSKLRKASWELIVKSDKGKEENNATAVSNLNSTEEINTKEINEAFDVHGNSNY
EQTDRFSSYDEDQYDYEDESDDYHDSETDSDLEYTGEGGSSLDQKTPDDDLVGVLGEEMS
LASLKASFEALAGNSALDSGSEGQKTISVTPKGCSELPKPTGKNKCGDTGRSAGALCVLP
LYAMLPAAAQLRVFEEIKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYNSTTGM
ETFEICWISKASAAQRAGRAGRTGPGHCYRLYSSAVFTNILSDFSCAEISKIPVDGVVLI
MKSMGIDKVGNFPFPTPPNAAALVEADRCLKALEALDSNGRLTPLGKAMSHYPMSPRHSR
MLLTVIQIMRKVKSYSRANLILGYAVAAAAALSLSNPFVRQFEGTHNNQDDLEPDQRSTA
LGSAKIAEKQEKSRKKKLKETAKISRAKFSNPSSDALSVAYALQCFELSNSPVEFCNDNA
LYLKTMEEMSKLRKQLLQLVFHQSINYCSEQDFRWTHGSVEDVEQVWRVLSSKNSLLLQE
EELLRQAICAGWADRVAKRIKGISVSSGDRKANAVRYQSSIVKETVFLHRWSSLSNSAPE
FLVYSELLHTKRSYLHGATSVKPEWLVRYAGSLCSFSAPLTNPKPYYDPNADQLFSWVIP
TFGPQLWQLPLHSLPINGDVHRVTVFAYALLKGHVLPCLKSVRRFMAAPPASILKPEAKG
QRRVGNLLFKLKTKSIDSCAKLRETWKGNPKELYPEILDWFQEGYNSHFEALWLQMLGEV
VLEPCKRFPKSVKRHKRKSL
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtctgcggaaaatgcagggcagtctatgatggatttgaagtgtgaaaaagat
tcattgagcatgcaagatggtgatagcaatgcattgatcttgccggcaaagagaacaaaa
aaaaggaagggcatgaatgcggatgaaatggccaaaatgaagaaatgcccaaagttgagc
aaatcccagaagagaaagttgatacagttggaggaggagaagcagaaagcatttttgcta
tctaaaagcattgagaacttggagaaatacaagatttcggaggatgcacattctcttttg
cgatcttcaaaaaatatcagtcgggttgaaactgtgaaagagaaacataggatggctgta
caattttccaagttaggattagaggttccaagcagtgaccagtatgccaagataaagagt
agtgatgaatcttgtgaatctgaacctgggttagatgaaagtcatataaggcaagataga
agggagaacgactccttacgaccgattatcgtagagagagaggtcctcgataaagcatca
tattcttttttcccttctcaatggcaagtttgcagcaatgactttggtctaaatggtgga
tacgtagctgaccaaccacctgaagaacttccaagtgatgagattgtcaaatctattcaa
gaagatgcaaggatttcttcactgtctttacgtagctgtgacgagaaagaatcctctgag
tcaaggagtaaattaggtgaaagcttaaatgcaaatgtcagcaaggaaagcaatttgcct
aatagtcttcagcaaggaccttgcagaccctcaactgtggtgcatgtatcaaggccatct
gaaattgaaaaccagaggatagatcttcctatagttatgatggagcaagagattatggaa
gctataaatgagaactccactgtcattgtttgtggagaaacaggctgtggtaaaaccacg
caagttcctcagttcctctatgaagctggctttggttcaaagcattacactgaccgaagt
ggaattattggagttactcaaccacgccgtgttgctgtccttgccactgctaagcgtgta
gcatttgagcttggttttcatcttggtaaagaggttggatttcaagttaggcatgacaaa
aggattggagacaagtgctctatcaagtttatgactgatggaatattacttcgagaagtt
cagaatgattttctgcttaagcgttactctgttataattctggatgaggctcatgagagg
agcttgaacacagatatacttattggaatgctctctcgtataattcaactccgccaggat
ttattcgagaagcagcaaaaattattgctttatggacagattgtaagtcctgaagacatg
atttttccattgaaacttgttatgatgagtgccaccttgcgagtggaggacttcatctct
ggaaaaaagttatttcgtaatcctcctcctgtggttgaagttcctacaaggcagtttcct
gttaccgtacatttttcgaagaaaacagaaattgtggattatattggccaggcctataag
aaggttttggcaattcataagaggctgccaccagggggcatacttgtatttgtcacgggg
cagagggaagttgagtatctgtgcagtaagctacgtaaagcttcatgggagctgattgtg
aagtctgataaaggtaaagaagaaaacaatgccactgctgtgtctaacttgaactccact
gaggaaatcaacacgaaggagatcaatgaagcatttgatgttcatgggaactcaaactat
gagcaaactgacaggtttagctcttatgatgaagatcagtatgattacgaagatgagtca
gatgattatcatgattctgaaacagatagtgatttggaatatactggtgaaggtggaagt
tcattggatcagaaaacccctgatgatgatcttgtaggggttttaggagaggaaatgagc
cttgcctcacttaaagcatcttttgaagctttggctggaaatagtgcgttggactccggt
tctgaggggcaaaagaccatttctgttactcctaaaggatgttcagagcttcccaaaccc
acgggaaagaataagtgtggagacactggtcgcagtgctggggcactgtgtgtccttcca
ctttatgccatgctgcctgcggcagcacagcttcgtgtgtttgaagagatcaaggaagga
gagcgacttgttgttgtagccactaatgtggctgaaacctctttaactatccctgggata
aagtatgtagttgatactggaagggaaaaagtgaagaactataattccaccactggtatg
gaaacatttgaaatctgttggatcagtaaagcatcagctgctcagcgagcaggaagagct
ggaaggaccggtcctggccactgttatcgtctttattcatcagctgtctttactaacata
ctttctgacttctcctgtgctgaaatatctaaaatacctgttgacggtgttgttcttatc
atgaaatcaatgggaattgacaaggttgggaatttcccttttccaactcctccaaatgca
gctgcattggtcgaagcggaccgttgcttgaaggctcttgaagcacttgatagcaatgga
agattgacgccccttgggaaggctatgtctcattatcccatgagtcctcgccactcccgg
atgctccttacagttatccagattatgaggaaggtgaaaagttatagcagggcaaattta
attcttggatacgctgtcgcagcagctgcggctttgagcttgtcaaatccttttgtcagg
cagtttgaaggaacccacaataatcaagatgacttagagccagatcagagatccactgct
ttaggtagtgcaaaaattgctgagaagcaagaaaaatctagaaaaaagaaacttaaagag
actgctaagatatcgcgagcaaaattttctaaccctagcagcgatgctctgagtgtagct
tatgcattgcagtgttttgaactttctaatagcccggttgaattttgcaatgacaatgca
ctataccttaaaaccatggaggaaatgtccaagctacgaaagcagcttcttcaactggtt
tttcaccaaagtattaattattgtagtgaacaggatttccgatggactcatggaagtgtg
gaggatgtggaacaagtttggcgggttttatccagtaagaactctcttttactgcaagag
gaagagctcttgcggcaagctatatgtgctggctgggctgatagggttgccaagcggatt
aaagggatctcagtgtcatcaggagatcgaaaagctaatgcagttcgttatcaatcatcc
attgttaaagaaacagttttcctacatcggtggtcttctctgtcgaactcagctcctgag
tttctagtgtacagtgaattgttacatacgaagcggtcatacctgcatggggcaacaagc
gtgaaaccagaatggcttgttagatatgcgggctctttatgcagtttctctgctcccctt
acgaaccccaagccatattatgaccctaatgctgaccaattattttcttgggtcattcca
acgtttgggcctcaattatggcagctaccattacatagtttgcccattaatggtgacgtg
caccgtgtgactgtttttgcttatgctttgcttaagggtcatgttttgccatgcttaaaa
tcagtccggaggttcatggcagcgccccctgcgagcattttgaagcccgaggcaaaaggt
caaaggcgtgtgggaaatcttctatttaagttaaagacaaagtcgattgatagttgtgct
aagctaagggagacatggaaagggaatcctaaggaactttatccggaaattttggattgg
tttcaggaaggttataatagtcactttgaagctctttggttgcaaatgcttggtgaagtt
gtgctagagccttgcaaacgctttccaaaatcggtcaagagacataagcggaaaagtctt
tga
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