Tripterygium wilfordii (thunder duke vine): 119982433
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Entry
119982433 CDS
T07256
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119982433
Membrane trafficking [BR:
twl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
119982433
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
119982433
NCBI-ProteinID:
XP_038681734
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Position
17:4391511..4404810
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AA seq
1119 aa
AA seq
DB search
MYTAYGWPQVIPLEIGLFPSTQQIIYLKVLNRLLLVVSPSHLELWSSHQHKVRLGKYKRD
VASVEKEGENIQAVWSPDGKLIAVLTSSFYLHILKVQFTEKRIQIGGKQPSALYLATISL
LLNEQVPFAEKDLKVSNIVSDNKYMLLGLSNGSLYSISWKGEFYGAFELDPYPFAALPNS
FGNGIASIGAPVDFLAENNISWKSAISHLELCFPLRLLFVLYSDGKLVSCSVSKKGLKQA
ESIKAEKKLGCGDAVCASVASEQQILAVGTIRGIVELYDLAESASLIRSVSLYDWGYSMD
DTGPVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSVSSPMVKPNQDCR
YEPLMTGTSRMQWDEYGYRLYTIEEGSSERIIAFSFGKCCLNRGVSGMTYVRQVIYGEDR
LLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMYLAVAGLHGLILYDIRLKKW
RVFGDITQEQKIQCKGLLWLGKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKPLLAK
PMVMDVYQDYILVTYHPFDVHIYLVKIIGELTPSSTPELQLSTVRELSIMTAKSHPSAMR
FIPDQIRGECASINHNFSSSDFSFREPTRCLILRVNGDLSLLDLGDGRERELTDSVELFW
VTCGQSEEMTSLIEEVSWLDYGHRGMQVWYPSPGVESFKQEDFLQLDPELEFDREVYPLG
LLPNAGVVVGVSQRMSFSACTEFPCFEASPQAQTILHCLLRHLLQRDKKEEALRLAQMSA
EKPHFSHCLEWLLFTVFEAEISRQNLSKNQASVPKHAAISLLEKTCDLIRNFAEYLDVVV
SVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYCALRL
LQATLDESLYELAGELVRFLLRSGRDYEQTSTDSDKLSPRFLGYFLFRSSYRKPSLDNSS
PSFKDQSAHVASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVDYLHRERYGSARLEN
FASGLELIAQKLQMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLFDLFHHDM
RLWEAYSLTLQSHSQFTEYHDLLGALEERLLPNSNFEET
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtatacggcatatggatggccgcaggtgatcccgctggagattgggcttttcccctcg
acgcagcagataatatacctaaaagttctcaatcgtctattgctcgtcgtctccccctct
cacctcgagctttggagctctcaccagcataaagtgaggttggggaagtacaagagggat
gtggcttctgtggagaaggagggtgagaatatacaggctgtgtggagccccgatggcaag
ttgattgcagttcttacttcgtctttctatcttcacatattgaaggtccagttcaccgaa
aaaagaatacaaattggagggaagcagccatctgctttgtatcttgctactatatcgctt
cttcttaatgagcaggtgccatttgcggaaaaggacttgaaagtgagcaatattgtgagt
gacaacaaatacatgcttcttggactttccaatggatctttatatagcatctcctggaaa
ggggagttctatggggcttttgaacttgatccttatccatttgctgcattaccaaattct
tttggtaatggcattgcttccattggggctcctgtagatttcttagctgaaaataatatt
tcttggaagtcggctatctcacacctggaactttgcttcccactaaggttgctgtttgtg
ttatattctgacgggaaacttgtgtcatgctctgtaagcaagaagggcttgaagcaagct
gaatcaattaaagctgaaaagaagttgggttgtggtgatgctgtatgtgcctcagtagca
tcagagcaacagatccttgctgttggtaccataagaggaattgttgagttgtatgacctg
gcggaatctgcatcacttattcgttctgtgtctttgtatgactggggatattcaatggat
gatactggtcctgtcagttgtattgcatggacgcctgataactctgcttttgctgttggg
tggaaattgagaggacttacagtatggtctgtctctggttgccgtttgatgtcaacaatc
cgtcaaattggtttgagttctgtgtcttctccaatggttaagcctaaccaggattgtaga
tatgaaccgttgatgactgggacctcacggatgcagtgggacgagtatggatataggctt
tacactattgaagaaggatcttcagagagaattattgcattttccttcgggaaatgctgt
cttaacagaggagtttccggcatgacttatgtccgtcaagtgatttatggcgaagatcgg
ctgcttgttgtgcaatctgaagatactgatgaactcaaaattctccatttaaaccttcca
gtttcatatatatcccaaaattggccagttcagcatgtggcagctagcaaggatggaatg
tacttagctgttgccggtctccatggtttgatcttgtatgatatacggttgaaaaaatgg
agagtttttggagatattactcaggaacaaaagattcaatgcaaaggtttattatggctg
gggaagattattgtcgtctgtaactacattgattcttcaaacacatatgaattacttttc
tatccaagatatcaccttgatcagagttctttgctctgtcgaaaacctttgcttgctaaa
cccatggtgatggatgtttatcaagattacatactcgtcacgtatcatccttttgatgtc
cacatataccttgtaaaaataattggtgaactgacgccttcaagtactccagagctgcag
ctttctacagtacgagaactctcaatcatgactgcgaagagccatccttcagcgatgcgc
tttatccctgatcagattcgcggggagtgtgcctcaatcaatcataacttctcttcctca
gatttttctttcagagagcctaccagatgtttgatcttgagggtgaatggtgatctttca
cttctggatctgggtgatggacgtgagagggaactcactgattctgtggaattattttgg
gttacttgcggtcaatcagaggagatgacaagtctaattgaggaagtttcatggttagat
tatggccacagagggatgcaggtctggtatccatctccgggtgttgagtcatttaaacaa
gaagatttcttgcagctggacccagagctggaatttgaccgtgaggtgtacccactgggc
cttcttccaaatgctggtgttgttgttggtgtttcccagcgaatgtccttttcagcatgt
acagagtttccatgttttgaggcatcccctcaagctcaaactatactccattgcctactc
cggcaccttcttcagagagacaaaaaagaggaggcgttacgtttggcacaaatgtcagca
gaaaagcctcatttttcccattgtttggagtggcttctttttactgtctttgaagctgaa
atttccaggcaaaatttaagcaagaaccaagcatctgtccctaagcatgcagccatttct
cttttggagaagacctgtgacttgatcagaaattttgctgagtatcttgacgtggttgtg
agtgtggcaagaaaaacagatggtcgacattgggcagatttgttttcggccgctggaaga
tcaacagagttgtttgaggaatgctttcaacgaaggtggtatcgtacagcagcttgctat
atacttgttattgctaaacttgaaggtcctgctgtcagtcagtactgcgctttgcgttta
ttgcaggcaacacttgatgagtctttatatgaacttgctggagagctggttcgattctta
ctgagatctggaagagactatgagcagacttcgacagattcagacaagctatctccaaga
ttcttgggttattttctttttcggtctagttacaggaagccatccttggataacagcagt
ccctcattcaaagaccagagtgctcatgttgcttcggttaagaatattttagagagccat
gctagctatttgatgtcagggaaagaactttccaagcttgttgcatttgtaaaaggcact
cagtttgatttggtggactatcttcatcgagaaagatatggctctgctcggttggagaat
tttgcgtcgggactggaactaatagctcaaaagcttcaaatgggtacactgcagagccgg
ttggatgcagaattcctgctggctcatatgtgctctgtcaagttcaaggagtggatagtt
gtcctggccactctactacgacgatctgaggttctttttgatcttttccaccatgacatg
cggttatgggaggcttacagcctcaccttgcagtcacattcgcaattcactgagtaccat
gatctgcttggagccttggaagagagacttttacccaactcaaattttgaagaaacgtga
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